Construct: ORF TRCN0000480049

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003166.1_s317c1
Derived from:
ccsbBroadEn_13682
DNA Barcode:
CATGTGCCAAAGCACATCCCAGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IDNK (414328)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480049
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 414328 IDNK IDNK gluconokinase NM_001256915.1 100% 100%
2 human 414328 IDNK IDNK gluconokinase NM_001351535.2 100% 100%
3 human 414328 IDNK IDNK gluconokinase XM_017014724.1 100% 100%
4 human 414328 IDNK IDNK gluconokinase NM_001001551.4 75.4% 75.4% 1_138del
5 human 414328 IDNK IDNK gluconokinase XM_006717111.4 75% 75% 1_141del
6 human 414328 IDNK IDNK gluconokinase XM_017014719.1 66.3% 67.1% (many diffs)
7 human 414328 IDNK IDNK gluconokinase XM_006717110.3 61.3% 61.3% 1_267del
8 human 414328 IDNK IDNK gluconokinase NR_046421.2 46.7% 1_136del;560_905del
9 human 414328 IDNK IDNK gluconokinase NR_046422.2 27.7% 1_753del;1177_1522del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
492
ORF length:
423
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttGGCACCAT GGGAAAAGGC ATACCGCTCA ATGACCAGGA CCGGATTCCA TGGCTCTGTA
121ACTTGCATGA CATTTTACTA AGAGATGTAG CCTCGGGACA GCGTGTGGTT CTAGCCTGTT
181CAGCCCTGAA GAAAACGTAC AGAGACATAT TAACACAAGG AAAAGATGGT GTAGCTCTGA
241AGTGTGAGGA GTCGGGAAAG GAAGCAAAGC AGGCTGAGAT GCAGCTCCTG GTGGTCCATC
301TGAGCGGGTC GTTTGAGGTC ATCTCTGGAC GCTTACTCAA AAGAGAGGGA CATTTTATGC
361CCCCTGAATT ATTGCAGTCC CAGTTTGAGA CTCTGGAGCC CCCAGCAGCT CCAGAAAACT
421TTATCCAAAT AAGTGTGGAC AAAAATGTTT CAGAGATAAT TGCTACAATT ATGGAAACCC
481TAAAAATGAA ATTGCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
541ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
601CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGACAT GTGCCAAAGC ACATCCCAGT
661CACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)