Construct: ORF TRCN0000480100

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013553.2_s317c1
Derived from:
ccsbBroadEn_09712
DNA Barcode:
AATTAACTCCTGAATATTCTTATT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GIMAP8 (155038)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480100
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 155038 GIMAP8 GTPase, IMAP family member 8 NM_175571.4 100% 100%
2 human 155038 GIMAP8 GTPase, IMAP family member 8 XM_005249950.4 100% 100%
3 human 155038 GIMAP8 GTPase, IMAP family member 8 XM_005249951.4 68.5% 68.5% 681_682ins627
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2064
ORF length:
1995
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gtcagagcag agctgccaga tgtccgaact gcggctcctc ctcctgggaa
121aatgccgctc gggaaaaagt gccacaggaa atgccattct gggcaaacat gtgttcaagt
181ccaagttcag tgatcagaca gtgatcaaaa tgtgccagag agagagttgg gtcctgagag
241aaaggaaggt tgtggtaatt gacacccctg accttttctc ctcaatagct tgtgctgaag
301acaagcaacg caacatccaa cactgcttgg agctctctgc tcccagcctc catgctctgc
361tcttggtaat tgccatcggc catttcacaa gggaggatga ggaaacagcc aagggcatcc
421aacaagtgtt tggagctgaa gccaggaggc acatcattat tgtcttcact cggaaggatg
481atttggggga tgacttgctg caagatttca ttgaaaaaaa caaacctctc aagcagttgg
541ttcaagacta tgagggccga tactgcattt tcaacaacaa gaccaatagt aaggatgagc
601agatcaccca ggtgttggag ctccttcgca aggttgagtc tttggtgaat acgaacggag
661gaccctatca tgtgaacttc aaaactgaag gcagcaggtt tcaagattgt gtgaatgaag
721ctgcatctca agagggagac aagccacagg gcccaaggga aaggcagctg cagtccacag
781gacccgagca gaatccgggg acatcagaac tgacagtcct ccttgtgggg aaacgcggtg
841ctggaaaaag tgcagcagga aacagcattc tggggaggca ggcctttcag accggattta
901gtgagcagtc agtaacccag agcttcttgt ctgagagcag aagctggaga aaaaagaaag
961tttcgatcat tgatgctccg gacatctcat ctttaaagaa cattgactca gaagttagaa
1021aacacatctg tacaggcccc catgccttcc tgctggtgac accactgggc ttttacacta
1081agaatgatga ggcagtgctg agcaccatcc aaaacaattt tggagaaaaa ttctttgagt
1141acatgatcat acttcttacc aggaaagaag atttagggga tcaggatcta gatacgttct
1201taagaaacag caataaagct ctctatggtc tcatccagaa gtgtaaaaac agatatagtg
1261ccttcaacta ccgggcaaca ggagaagaag agcaaaggca ggcggacgag ctcctggaaa
1321aaattgagag catggtgcat cagaatggga acaagcattg tgttttcaga gaaaaagaaa
1381ccctgaacat tgtccttgtg gggagaagcg ggactgggaa gagtgcgacc gggaactcta
1441tcctggggag cctcgtcttc acctctcggc tccgggccca gccagtcacc aagaccagcc
1501agagtggcag gaggacatgg gacggacagg aggtggtggt tgtggacact ccttccttca
1561accagatgct ggatgtcgaa aaggacccat cccggttaga agaggaggtc aagcgctgtt
1621tgtcctgctg tgaaaaaggg gacacatttt ttgtcctggt gttccagctg ggacgattca
1681ctgaagagga caaaaCAGCT GTGGCGAAAC TGGAGGCCAT CTTTGGAGCA GACTTTACGA
1741AATACGCGAT TATGCTGTTC ACCCGGAAGG AAGACCTAGG GGCGGGGAAT TTGGAAGACT
1801TCATGAAGAA CTCAGATAAC AAAGCCCTTC GGCGCATTTT TAAAAAGTGT GGGCGGCGAG
1861TTTGTGCTTT TAACAACAAA GAAACAGGCC AGGCCCAGGA AACCCAGGTG AAAGCTCTTT
1921TAACAAAGGT CAATGATCTG AGAAAAGAAA GTGGGTGGTC CGGGTATCCC CATACACAGG
1981AGAACGTCAG CAAACTAATT AAAAATGTCC AGGAAATGTC CCAAGCCGAA AAACTCCTTA
2041AAAATTTAAT AGGTATTTTA CAATTGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
2101AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
2161TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAA ATTAACTCCT
2221GAATATTCTT ATTACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
2281att

Download FASTA (ORF) (Full)