Construct: ORF TRCN0000480432

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018988.3_s317c1
Derived from:
ccsbBroadEn_14632
DNA Barcode:
CTGACGCAGTTTGTCTGTGAGAGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ERBB3 (2065)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480432
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2065 ERBB3 erb-b2 receptor tyrosine ki... NM_001982.3 99.9% 100% 4026delG
2 human 2065 ERBB3 erb-b2 receptor tyrosine ki... NM_001005915.1 12.9% 10.9% (many diffs)
3 mouse 13867 Erbb3 erb-b2 receptor tyrosine ki... NM_010153.1 86.7% 90.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
4095
ORF length:
4026
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagggcgaac gacgctctgc aggtgctggg cttgcttttc agcctggccc
121ggggctccga ggtgggcaac tctcaggcag tgtgtcctgg gactctgaat ggcctgagtg
181tgaccggcga tgctgagaac caataccaga cactgtacaa gctctacgag aggtgtgagg
241tggtgatggg gaaccttgag attgtgctca cgggacacaa tgccgacctc tccttcctgc
301agtggattcg agaagtgaca ggctatgtcc tcgtggccat gaatgaattc tctactctac
361cattgcccaa cctccgcgtg gtgcgaggga cccaggtcta cgatgggaag tttgccatct
421tcgtcatgtt gaactataac accaactcca gccacgctct gcgccagctc cgcttgactc
481agctcaccga gattctgtca gggggtgttt atattgagaa gaacgataag ctttgtcaca
541tggacacaat tgactggagg gacatcgtga gggaccgaga tgctgagata gtggtgaagg
601acaatggcag aagctgtccc ccctgtcatg aggtttgcaa ggggcgatgc tggggtcctg
661gatcagaaga ctgccagaca ttgaccaaga ccatctgtgc tcctcagtgt aatggtcact
721gctttgggcc caaccccaac cagtgctgcc atgatgagtg tgccgggggc tgctcaggcc
781ctcaggacac agactgcttt gcctgccggc acttcaatga cagtggagcc tgtgtacctc
841gctgtccaca gcctcttgtc tacaacaagc taactttcca gctggaaccc aatccccaca
901ccaagtatca gtatggagga gtttgtgtag ccagctgtcc ccataacttt gtggtggatc
961aaacatcctg tgtcagggcc tgtcctcctg acaagatgga agtagataaa aatgggctca
1021agatgtgtga gccttgtggg ggactatgtc ccaaagcctg tgagggaaca ggctctggga
1081gccgcttcca gactgtggac tcgagcaaca ttgatggatt tgtgaactgc accaagatcc
1141tgggcaacct ggactttctg atcaccggcc tcaatggaga cccctggcac aagatccctg
1201ccctggaccc agagaagctc aatgtcttcc ggacagtacg ggagatcaca ggttacctga
1261acatccagtc ctggccgccc cacatgcaca acttcagtgt tttttccaat ttgacaacca
1321ttggaggcag aagcctctac aaccggggct tctcattgtt gatcatgaag aacttgaatg
1381tcacatctct gggcttccga tccctgaagg aaattagtgc tgggcgtatc tatataagtg
1441ccaataggca gctctgctac caccactctt tgaactggac caaggtgctt cgggggccta
1501cggaagagcg actagacatc aagcataatc ggccgcgcag agactgcgtg gcagagggca
1561aagtgtgtga cccactgtgc tcctctgggg gatgctgggg cccaggccct ggtcagtgct
1621tgtcctgtcg aaattatagc cgaggaggtg tctgtgtgac ccactgcaac tttctgaatg
1681gggagcctcg agaatttgcc catgaggccg aatgcttctc ctgccacccg gaatgccaac
1741ccatggaggg cactgccaca tgcaatggct cgggctctga tacttgtgct caatgtgccc
1801attttcgaga tgggccccac tgtgtgagca gctgccccca tggagtccta ggtgccaagg
1861gcccaatcta caagtaccca gatgttcaga atgaatgtcg gccctgccat gagaactgca
1921cccaggggtg taaaggacca gagcttcaag actgtttagg acaaacactg gtgctgatcg
1981gcaaaaccca tctgacaatg gctttgacag tgatagcagg attggtagtg attttcatga
2041tgctgggcgg cacttttctc tactggcgtg ggcgccggat tcagaataaa agggctatga
2101ggcgatactt ggaacggggt gagagcatag agcctctgga ccccagtgag aaggctaaca
2161aagtcttggc cagaatcttc aaagagacag agctaaggaa gcttaaagtg cttggctcgg
2221gtgtctttgg aactgtgcac aaaggagtgt ggatccctga gggtgaatca atcaagattc
2281cagtctgcat taaagtcatt gaggacaaga gtggacggca gagttttcaa gctgtgacag
2341atcatatgct ggccattggc agcctggacc atgcccacat tgtaaggctg ctgggactat
2401gcccagggtc atctctgcag cttgtcactc aatatttgcc tctgggttct ctgctggatc
2461atgtgagaca acaccggggg gcactggggc cacagctgct gctcaactgg ggagtacaaa
2521ttgccaaggg aatgtactac cttgaggaac atggtatggt gcatagaaac ctggctgccc
2581gaaacgtgct actcaagtca cccagtcagg ttcaggtggc agattttggt gtggctgacc
2641tgctgcctcc tgatgataag cagctgctat acagtgaggc caagactcca attaagtgga
2701tggcccttga gagtatccac tttgggaaat acacacacca gagtgatgtc tggagctatg
2761gtgtgacagt ttgggagttg atgaccttcg gggcagagcc ctatgcaggg ctacgattgg
2821ctgaagtacc agacctgcta gagaaggggg agcggttggc acagccccag atctgcacaa
2881ttgatgtcta catggtgatg gtcaagtgtt ggatgattga tgagaacatt cgcccaacct
2941ttaaagaact agccaatgag ttcaccagga tggcccgaga cccaccacgg tatctggtca
3001taaagagaga gagtgggcct ggaatagccc ctgggccaga gccccatggt ctgacaaaca
3061agaagctaga ggaagtagag ctggagccag aactagacct agacctagac ttggaagcag
3121aggaggacaa cctggcaacc accacactgg gctccgccct cagcctacca gttggaacac
3181ttaatcggcc acgtgggagc cagagccttt taagtccatc atctggatac atgcccatga
3241accagggtaa tcttggggag tcttgccagg agtctgcagt ttctgggagc agtgaacggt
3301gcccccgtcc agtctctcta cacccaatgc cacggggatg cctggcatca gagtcatcag
3361aggggcatgt aacaggctct gaggctgagc tccaggagaa agtgtcaatg tgtaggagcc
3421ggagcaggag ccggagccca cggccacgcg gagatagcgc ctaccattcc cagcgccaca
3481gtctgctgac tcctgttacc ccactctccc cacccgggtt agaggaagag gatgtcaacg
3541gttatgtcat gccagataca cacctcaaag gtactccctc ctcccgggaa ggcacccttt
3601cttcagtggg tctcagttct gtcctgggta ctgaagaaga agatgaagat gaggagtatg
3661aatacatgaa ccggaggaga aggcacagtc cacctcatcc ccctaggcca agttcccttg
3721aggagctggg ttatgagtac atggatgtgg ggTCAGACCT CAGTGCCTCT CTGGGCAGCA
3781CACAGAGTTG CCCACTCCAC CCTGTACCCA TCATGCCCAC TGCAGGCACA ACTCCAGATG
3841AAGACTATGA ATATATGAAT CGGCAACGAG ATGGAGGTGG TCCTGGGGGT GATTATGCAG
3901CCATGGGGGC CTGCCCAGCA TCTGAGCAAG GGTATGAAGA GATGAGAGCT TTTCAGGGGC
3961CTGGACATCA GGCCCCCCAT GTCCATTATG CCCGCCTAAA AACTCTACGT AGCTTAGAGG
4021CTACAGACTC TGCCTTTGAT AACCCTGATT ACTGGCATAG CAGGCTTTTC CCCAAGGCTA
4081ATGCCCAGAG AACGCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
4141ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
4201CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGACTG ACGCAGTTTG TCTGTGAGAG
4261GACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)