Construct: ORF TRCN0000480543

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003698.1_s317c1
Derived from:
ccsbBroadEn_01425
DNA Barcode:
GGCCCTCGGACTTACATGTGGACA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPL22 (6146)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480543
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6146 RPL22 ribosomal protein L22 NM_000983.4 100% 100%
2 mouse 19934 Rpl22 ribosomal protein L22 NM_009079.3 89% 99.2% (many diffs)
3 mouse 669393 Gm9457 predicted gene 9457 XM_001473319.2 77.4% 81.8% (many diffs)
4 mouse 19934 Rpl22 ribosomal protein L22 NM_001277113.1 74.6% 81.4% (many diffs)
5 mouse 19934 Rpl22 ribosomal protein L22 NM_001277114.1 59.7% 61.7% (many diffs)
6 mouse 19934 Rpl22 ribosomal protein L22 NR_102292.1 14.5% (many diffs)
7 mouse 19934 Rpl22 ribosomal protein L22 NR_102291.1 14.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
450
ORF length:
384
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc TCCTGTGAAA AAGCTTGTGG TGAAGGGGGG CAAAAAAAAG AAGCAAGTTC
121TGAAGTTCAC TCTTGATTGC ACCCACCCTG TAGAAGATGG AATCATGGAT GCTGCCAATT
181TTGAGCAGTT TTTGCAAGAA AGGATCAAAG TGAACGGAAA AGCTGGGAAC CTTGGTGGAG
241GGGTGGTGAC CATCGAAAGG AGCAAGAGCA AGATCACCGT GACATCCGAG GTGCCTTTCT
301CCAAAAGGTA TTTGAAATAT CTCACCAAAA AATATTTGAA GAAGAATAAT CTACGTGACT
361GGTTGCGCGT AGTTGCTAAC AGCAAAGAGA GTTACGAATT ACGTTACTTC CAGATTAACC
421AGGACGAAGA AGAGGAGGAA GACGAGGATT ACCCAACTTT CTTGTACAAA GTGGTTGATA
481TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
541CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAGGCCC
601TCGGACTTAC ATGTGGACAA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
661tgaaagatt

Download FASTA (ORF) (Full)