Construct: ORF TRCN0000480669

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007531.1_s317c1
Derived from:
ccsbBroadEn_05408
DNA Barcode:
GGGGGCGTCATATAACAAACAATG
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TREML4 (285852)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480669
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 285852 TREML4 triggering receptor express... NM_198153.3 100% 100%
2 human 340206 TREML3P triggering receptor express... NR_027256.1 34.9% (many diffs)
3 human 285852 TREML4 triggering receptor express... XR_001743356.2 18.4% 1_141del;646_787del;884_3253del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
669
ORF length:
600
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcctggggt ggggtccaca cctgctgctt ccacctgtgc tgctgctgct
121cctggcctca gggtgctgtg cctgaagaac ttcacaaaca cccaggacag accctcctcc
181tgcaatgcca gtactcaccc aagagagggc cctatcagcc caaatcctgg tgtcagcaga
241catctccaag tcggtgtaCC TTACTTGTCA CCAGCTCCAA GCCCTGGACA GCAGTTCAGA
301AGTCTCATTA CACAATCTGG GACAAGCCCA ATGCTGGCTT CTTCAACATC ACCATGATTC
361AGCTGACACA GAATGACTCG GGATTCTACT GGTGTGGAAT CTACAACGCT TCCGAAAACA
421TCATCACTGT TCTTAGAAAT ATCAGCCTGG TGGTGTCTCC AGCCCCAACC ACGTCTCCTA
481TGTGGACTCT TCCCTGGCTC CCAACAAGCA CAGTTCTGAT CACTTCTCCA GAGGGGACCT
541CTGGCCATCC CTCCATCAAT GGCTCTGAGA CCAGGAAATC AAGAGCCCCT GCCTGCCTTG
601GCTCAGGTGG CCCCAGATTC CTGGTCTTGG TGCTATGTGG ACTCCTCCTG GCCAAGGGCC
661TGATGTTGTG CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC
721TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT
781TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAGGGGGCG TCATATAACA AACAATGACG
841CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)