Construct: ORF TRCN0000480843

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011774.1_s317c1
Derived from:
ccsbBroadEn_01214
DNA Barcode:
TCTAGTCAGAAGACCTATAGCCAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLA2G5 (5322)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480843
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5322 PLA2G5 phospholipase A2 group V NM_000929.3 100% 100%
2 human 5322 PLA2G5 phospholipase A2 group V XM_005245893.5 100% 100%
3 human 5322 PLA2G5 phospholipase A2 group V XM_011541587.3 100% 100%
4 human 5322 PLA2G5 phospholipase A2 group V XM_011541588.3 100% 100%
5 human 5322 PLA2G5 phospholipase A2 group V XM_011541589.3 100% 100%
6 human 5322 PLA2G5 phospholipase A2 group V XM_011541590.3 100% 100%
7 human 5322 PLA2G5 phospholipase A2 group V XM_011541591.3 100% 100%
8 human 5322 PLA2G5 phospholipase A2 group V XM_011541592.3 100% 100%
9 human 5322 PLA2G5 phospholipase A2 group V XM_005245891.5 81.6% 81.6% 1_93del
10 human 5322 PLA2G5 phospholipase A2 group V XM_005245892.5 81.6% 81.6% 1_93del
11 human 5322 PLA2G5 phospholipase A2 group V XM_011541586.3 81.6% 81.6% 1_93del
12 human 5322 PLA2G5 phospholipase A2 group V XM_024447706.1 63.7% 44.5% 185_261del;390_391ins101
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
480
ORF length:
414
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa aggcctcctc ccactggctt ggttcctggc ttgtagtgtg cctgctgtgc
121aaggaggctt gctggaccta aaatcaatga tcgagaaggt gacagggaag aacgccctga
181caaactacgg cttctacggc tgtTACTGCG GCTGGGGCGG CCGAGGAACC CCCAAGGATG
241GCACCGATTG GTGCTGTTGG GCGCATGACC ACTGCTATGG GCGGCTGGAG GAGAAGGGCT
301GCAACATTCG CACACAGTCC TACAAATACA GATTCGCGTG GGGCGTGGTC ACCTGCGAGC
361CCGGGCCCTT CTGCCATGTG AACCTCTGTG CCTGTGACCG GAAGCTCGTC TACTGCCTCA
421AGAGAAACCT ACGGAGCTAC AACCCACAGT ACCAATACTT TCCCAACATC CTCTGCTCCT
481ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
541GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
601TTTATATATC TTGTGGAAAG GACGATCTAG TCAGAAGACC TATAGCCAGA CGCGTTAAGT
661Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)