Construct: ORF TRCN0000481062

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000592.1_s317c1
Derived from:
ccsbBroadEn_00023
DNA Barcode:
TCCCGAGATTACATTTCAGACAAT
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
ADA (100)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481062
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 100 ADA adenosine deaminase NM_000022.4 99.9% 100% 36G>A
2 human 100 ADA adenosine deaminase NM_001322051.1 93.3% 93.3% 604_605ins72
3 human 100 ADA adenosine deaminase NR_136160.1 64.9% (many diffs)
4 human 100 ADA adenosine deaminase NM_001322050.1 62.8% 55.3% 0_1ins289;72_73ins116
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1155
ORF length:
1089
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ccagacgccc gccttcgaca agcccaaagt agaactgcat gtccacctag
121acggatccat caagcctgaa accatcttat actatggcag gaggagaggg atcgccctcc
181cagctaacac agcagagggg ctgctgaacg tcattggcat ggacaagccg ctcacccttc
241cagacttcct ggccaagttt gactactaca tgcctgctat cgcgggctgc cgggaggcta
301tcaaaaggat cgcctatgag tttgtagaga tgaaggccaa agagggcgtg gtgtatgtgg
361aggtgcggta cagtccgcac ctgctggcca actccaaagt ggagccaatc ccctggaacc
421aggctgaagg ggacctcacc ccagacgagg tggtggccct agtgggccag ggcctgcagg
481agggggagcg agacttcggg gtcaaggccc ggtccatcct gtgctgcatg cgccaccagc
541ccaactggtc ccccaaggtg gtggagctgt gtaagaagta ccagcagcag accgtggtag
601ccattgacct ggctggagat gagaccatcc caggaagcag cctcttgcct ggacatgtcc
661aggccTACCA GGAGGCTGTG AAGAGCGGCA TTCACCGTAC TGTCCACGCC GGGGAGGTGG
721GCTCGGCCGA AGTAGTAAAA GAGGCTGTGG ACATACTCAA GACAGAGCGG CTGGGACACG
781GCTACCACAC CCTGGAAGAC CAGGCCCTTT ATAACAGGCT GCGGCAGGAA AACATGCACT
841TCGAGATCTG CCCCTGGTCC AGCTACCTCA CTGGTGCCTG GAAGCCGGAC ACGGAGCATG
901CAGTCATTCG GCTCAAAAAT GACCAGGCTA ACTACTCGCT CAACACAGAT GACCCGCTCA
961TCTTCAAGTC CACCCTGGAC ACTGATTACC AGATGACCAA ACGGGACATG GGCTTTACTG
1021AAGAGGAGTT TAAAAGGCTG AACATCAATG CGGCCAAATC TAGTTTCCTC CCAGAAGATG
1081AAAAGAGGGA GCTTCTCGAC CTGCTCTATA AAGCCTATGG GATGCCACCT TCAGCCTCTG
1141CAGGGCAGAA CCTCTGACCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1201CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
1261TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA TCCCGAGATT ACATTTCAGA
1321CAATACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)