Construct: ORF TRCN0000481284

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008438.1_s317c1
Derived from:
ccsbBroadEn_01334
DNA Barcode:
CGATCTCTAGACCCTGATGTGCAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PTGIS (5740)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481284
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5740 PTGIS prostaglandin I2 synthase NM_000961.4 100% 100%
2 mouse 19223 Ptgis prostaglandin I2 (prostacyc... NM_008968.3 83.8% 85.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1569
ORF length:
1500
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcttgggcc gcgctcctcg gcctcctggc cgcactgttg ctgctgctgc
121tactgagccg ccgccgcacg cggcgacctg gtgagcctcc cctggacctg ggcagcatcc
181cctggttggg gtatgccttg gactttggaa aagatgctgc cagcttcctc acgaggatga
241aggagaagca cggtgacatc tttactatac tggttggggg caggtatgtc accgttctcc
301tggacccaca ctcctacgac gcggtggtgt gggagcctcg caccaggctc gacttccatg
361cctatgccat cttcctcatg gagaggattt ttgatgtgca gcttccacat tacagcccca
421gtgatgaaaa ggccaggatg aaactgactc ttctccacag agagctccag gcactcacag
481aagccatgta taccaacctc catgcagtgc tgttgggcga tgctacagaa gcaggcagtg
541gctggcacga gatgggtctc ctcgacttct cctacagctt cctgctcaga gccggctacc
601tgactcttta cggaattgag gcgctgccac gcacccatga aagccaggcc caggaccgcg
661tccactcagc tgatgtcttc cacacctttc gccagctcga ccggctgctc cccaaactgg
721cccgtggctc cctgtcagtg ggggacaagg accacatgtg cagtgtcaaa agtcgcctgt
781ggaagctgct atccccagcc aggctggcca ggcgggccca ccggagcaaa tggctggaga
841gttacctgct gcacctggag gagatgggtg tgtcagagga gatgcaggca cgggccctgg
901tgctgcagct gtgggccaca caggggaata tgggtcccgc tgccttctgg ctcctgctct
961tccttctcaa gaatcctgaa gccctggctg ctgtccgcgg agagctcgag agtatccttt
1021ggcaagcgga gcagcctgtc tcgcagacga ccactctccc acagaaggtt ctagacagca
1081cacctgtgct tgatagcgtg ctgagtgaga gcctcaggct tacagctgcc cccttcatca
1141cccgcgaggt tgtggtggac ctggccatgc ccatggcaga cgggcgagaa ttcaaccTGC
1201GACGTGGTGA CCGCCTCCTC CTCTTCCCCT TCCTGAGCCC CCAGAGAGAC CCAGAAATCT
1261ACACAGACCC AGAGGTATTT AAATACAACC GATTCCTGAA CCCTGACGGA TCAGAGAAGA
1321AAGACTTTTA CAAGGATGGG AAACGGCTGA AGAATTACAA CATGCCCTGG GGGGCGGGGC
1381ACAATCACTG CCTGGGGAGG AGTTATGCGG TCAACAGCAT CAAACAATTT GTGTTCCTTG
1441TGCTGGTGCA CTTGGACTTG GAGCTGATCA ACGCAGATGT GGAGATCCCT GAGTTTGACC
1501TCAGCAGGTA CGGCTTCGGT CTGATGCAGC CGGAACACGA CGTGCCCGTC CGCTACCGCA
1561TCCGCCCATT GCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1621CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1681TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACGATCT CTAGACCCTG ATGTGCAAAC
1741GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)