Construct: ORF TRCN0000481361

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006418.2_s317c1
Derived from:
ccsbBroadEn_04547
DNA Barcode:
GTACCGTCGAAGACCCCGAGGAGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PCED1B (91523)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481361
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91523 PCED1B PC-esterase domain containi... NM_001281429.1 100% 100%
2 human 91523 PCED1B PC-esterase domain containi... NM_138371.3 100% 100%
3 human 91523 PCED1B PC-esterase domain containi... XM_005269224.5 100% 100%
4 human 91523 PCED1B PC-esterase domain containi... XM_011538978.2 100% 100%
5 human 91523 PCED1B PC-esterase domain containi... XM_017020207.1 100% 100%
6 human 91523 PCED1B PC-esterase domain containi... XM_017020208.1 100% 100%
7 human 91523 PCED1B PC-esterase domain containi... XM_017020209.1 100% 100%
8 human 91523 PCED1B PC-esterase domain containi... XM_017020210.1 100% 100%
9 human 91523 PCED1B PC-esterase domain containi... XM_017020211.1 100% 100%
10 human 91523 PCED1B PC-esterase domain containi... XM_017020212.1 100% 100%
11 human 91523 PCED1B PC-esterase domain containi... XM_017020213.1 100% 100%
12 human 91523 PCED1B PC-esterase domain containi... XM_017020214.1 100% 100%
13 human 91523 PCED1B PC-esterase domain containi... XM_017020215.1 100% 100%
14 human 91523 PCED1B PC-esterase domain containi... XM_017020216.1 100% 100%
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1362
ORF length:
1296
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgat ccttctgcgg gcctccgaag tgcggcagct gcttcacaat aagttcgtgg
121tcatcctggg ggactctgtg catagggcag tatacaagga cctggtgctt ctgctgcaga
181aggaccgcct gctcactccc gggcagctta gagcaagggg ggagctgaac ttcgaacaag
241atgagctggt ggacggaggc cagcggggcc acatgcacaa cggccttaac taccgtgagg
301tccgcgagtt ccgctccgac caccatctgg tacgttttta cttcctcacc cgcgtgtact
361ccgattacct ccagaccatc ttgaaagagc tgcagtcggg cgagcacgcc cccgacctgg
421tcatcatgaa ttcctgcctc tgggacatct ccaggtatgg tccgaactcc tggagaagct
481acctggagaa cctggagaac ctgttccagt gcctgggcca ggtgctgccc gagtcttgcc
541tcctggtgtg gaacacggcc atgcctgtgg gcgaggaagt caccgggggt tttcttccgc
601ccaagctccg gcggcagaag gccaccttcc tgaaaaacga agtggtcaaa gccaacttcc
661acagcgccac cgaggcacgt aaacataact tcgatgtact ggacttgcat ttccacttcc
721gccacgcgag ggagaacctg cactgggacg gggtgcactg gaatggacgt gtgcaccgct
781gcctctccca gctgctgctg gcccacgtgg ccgacgcctg gggtgtggag ctgccccacc
841gccaccccgt gggcgagtgg atcaagaaga aaaaacctgg cccgagagtc gaagggccgc
901cccaggccaa cagaaatcac ccggccttac ctctgtcccc acCCTTACCT TCCCCCACAT
961ACCGCCCCCT GCTTGGGTTC CCACCCCAGC GCTTGCCGCT GCTCCCGCTC CTGTCCCCAC
1021AGCCTCCTCC TCCCATTCTC CATCACCAGG GAATGCCCCG GTTCCCACAG GGTCCCCCAG
1081ATGCCTGTTT TTCCTCAGAC CATACTTTCC AGTCGGATCA ATTCTATTGC CATTCAGATG
1141TCCCCTCATC AGCCCATGCA GGTTTCTTCG TCGAAGACAA TTTTATGGTT GGTCCTCAGC
1201TGCCTATGCC CTTCTTCCCC ACACCCCGTT ATCAGCGGCC TGCCCCAGTG GTACATAGGG
1261GTTTTGGCAG GTATCGTCCC CGTGGCCCCT ATACGCCCTG GGGACAGCGG CCTCGACCTT
1321CAAAGAGAAG GGCCCCAGCC AATCCTGAGC CAAGGCCTCA ATACCCAACT TTCTTGTACA
1381AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1441AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1501AGGACGAGTA CCGTCGAAGA CCCCGAGGAG CACGCGTTAA GTCgacaatc aacctctgga
1561ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)