Construct: ORF TRCN0000481432

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005294.1_s317c1
Derived from:
ccsbBroadEn_14301
DNA Barcode:
TGCGAGCCACCGCGAAGAGGTGTG
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
EMILIN2 (84034)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481432
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84034 EMILIN2 elastin microfibril interfa... NM_032048.3 99.9% 54.2% 414C>T;1673_1674insG;2364G>A
2 human 84034 EMILIN2 elastin microfibril interfa... XM_017026038.2 77.9% 68.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1893
ORF length:
1824
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gtggcagccc agacggccct ggccccgcgt gccctggcgc tgggcgctgg
121cgctgctggc cctggttggc gcggggctgt gccacgccgg cccgcagccc gggtatcccg
181cgcggcccag cgccaggaac aagaactggt gcgcctacat cgtgaacaag aatgtgagct
241gctccgtgct ggagggaagt gagagtttta ttcaggctca gtacaactgt gcctggaacc
301agatgccctg tccgtcggcg ctggtgtatc gagtgaactt cagacctaga tatgtcacta
361ggtataagac agtgacacag ttggaatgga ggtgctgtcc tggctttaga gggggagatt
421gccaagaagg tcccaaagac cccgtgaaga ccctccgccc cacgccggct cggcctcgaa
481atagcttgaa gaaagccaca gataatgaac ccagccaatt ctcagagccc aggaagactt
541tgtccccaac tggtacagca caaccaagct ggggggtaga tccaaaagag gggcctcagg
601aacttcagga aaagaagata caggtgctag aggagaaggt tcttcgactc acaaggacgg
661ttcttgacct ccagtcttcc cttgctggag tgagtgaaaa tctcaaacat gccactcagg
721atgatgccag tagaacacgg gcaccagggc tcagcagcca gcaccccaag cctgacacca
781ctgttagtgg agacacagaa acgggccaga gtcctggtgt cttcaacact aaggaatctg
841gcatgaagga catcaagtct gaattggctg aagtcaaaga tactctaaag aacaaaagtg
901acaagctgga agagctggat ggaaaagtga agggctacga agggcagctc agacagctcc
961aggaagcagc tcagggcccg acggtgacca tgacaaccaa cgaactctac caagcctatg
1021tggacagtaa gatcgacgcc ctgagagagg agctcatgga gggcatggac agaaagctgg
1081ctgacctgaa aaactcatgt gagtacaagc tcactggcct ccagcagcag tgtgatgact
1141atgggagcag ctacctggga gtgatagagc tcatagggga gaaggaaaca agcctgagaa
1201aagaaataaa taacctccga gcccggctac aggagccttc agcccaggca aattgctgcg
1261acagtgaaaa gaatggtgac attggtcaac agatcaagac attggaccag aaaatcgaga
1321gagttgctga agccaccaga atgctgaatg gaagactgga caatgagttt gaccgcctta
1381tagttccaga gccagatgtg gattttgatg caaaatggaa tgaactcgat gcaaggatca
1441atgtgacgga gaagaacgct gaagaacatt gcttttacat tgaggaaacc cttcggggcg
1501ccattaatgg agaggtgggt gacttgaagc agcttgttga tcagaaaata cagtctctgg
1561aagaccgtct ggggagcgtt ctcctacaga tgaccaataa cactggtgca gagctcagtc
1621ccccaggggc agcagccctg ccaggagtgt cagggtcagg agatgaacgg gtcatgatgg
1681aattaaacca cctgaaggac aaagttcaag ttgttgaaga catttgcctg ctgaacatcc
1741aggggaaagc ctcatgggat ggaaggtgcc ttgccaaaca gggaagaccg cgcagtacgc
1801gacagcctgc accttttgaa atctctcaac gacacgatgc acaggaagtt tcaagaaacc
1861gaacaaacca tccagaaact tcaacaggat tttagttttc tttattctca attaaaccac
1921acagaaaatg atgtgactca tcttcaaaag gaaatgagca attgtagagc aggtgaaaac
1981gctggcatgg gtaggttcac taaggtgggt gagcaagaaa ggacagtgga caccctgccg
2041tccccccagc accccgtggc tcattgctgc agtcagctgg aggagaggtg gcagaggttg
2101cagagccagg tcatctcgga gctggatgct tgtaaggaat gcacgcaggg ggtccagagg
2161gaggtctcca tggtggaggg cagggtgtct catatggaga aaacttgcag caagctggac
2221tctatctcag gaaatcttca gaggatcaag gaggggctca acaagcatgt cagcagcctg
2281tggaactgtg tcaggcagat gaacggaacg ctcaggtcgc attccagaga catttctggc
2341ctgaagaatt cagtccagca gttctacagc cacgtcttcc agatttctac tgatttgcaa
2401gatctggtca aatttcagcc atcagcaaag gcaccctcgc ccccgccgcc cgcagaggcc
2461ccgaaggagc cgctgcagcc cgagcccgcc ccgccgaggc ccagcggccc cgcaaccgca
2521gaggaccctg ggcgacggcc cgtcctgccc cagcggcccc ccgaggagag gccgccccag
2581ccgccaggct ccaccggggt catcgcggag acgggccagg ccgggccccc cgcaggcgca
2641ggcgtgtctg ggcggggtct gccgcggggc gtggacggcc agaccgggag cggcaccgtc
2701cccggcgcag aaggcttcgc gggcgcacca ggatacccga agtcacctcc tgtagcttcc
2761ccaggagctc cggtgccttc tctggtgtct ttttctgcgg ggctcaccca gaagcctttc
2821cccagtgatg ggggcgttgt cctctttaac aaagtgctgg tgaacgacgg gGATGTTTAC
2881AACCCCAGCA CCGGGGTCTT CACGGCTCCT TATGATGGGC GCTACCTGAT CACGGCCACC
2941CTCACCCCCG AGAGAGACGC CTACGTGGAA GCAGTGCTGT CGGTCTCCAA CGCCAGCGTG
3001GCCCAGCTGC ATACCGCTGG GTACAGGAGA GAGTTCCTGG AATACCACCG CCCTCCAGGA
3061GCTTTGCATA CCTGCGGGGG CCCGGGGGCA TTCCACCTCA TCGTGCACCT GAAGGCGGGA
3121GATGCAGTCA ACGTCGTGGT GACTGGGGGC AAGCTGGCTC ACACAGACTT TGATGAAATG
3181TACTCCACAT TTAGTGGGGT TTTCTTATAT CCTTTCCTTT CCCACCTCTT GCCAACTTTC
3241TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT
3301ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT
3361TGTGGAAAGG ACGATGCGAG CCACCGCGAA GAGGTGTGAC GCGTTAAGTC gacaatcaac
3421ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)