Construct: ORF TRCN0000487705
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019313.1_s317c1
- DNA Barcode:
- CTCTCCAGGTGTTGCTTATACACA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GPR152 (390212)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000487705
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 390212 | GPR152 | G protein-coupled receptor 152 | NM_206997.1 | 99.8% | 99.7% | 237G>A;1410_1411insG |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 75
- ORF end:
- 1488
- ORF length:
- 1413
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcgc caccatggac actaccatgg aagctgacct gggtgccact ggccacaggc 121 cccgcacaga gcttgatgat gaggactcct acccccaagg tggctgggac acggtcttcc 181 tggtggccct gctgctcctt gggctgccag ccaatgggtt gatggcgtgg ctggccggct 241 cccaggcccg gcatggagct ggcacgcgtc tggcgctgct cctgctcagc ctggccctct 301 ctgacttctt attcctggca gcagcggcct tccagatcct agagatccgg catgggggac 361 actggccgct ggggacagct gcctgccgct tctactactt cctatggggc gtgtcctact 421 cctccggcct cttcctgctg gccgccctca gcctcgaccg ctgcctgctg gcgctgtgcc 481 cacactggta ccctgggcac cgcccagtcc gcctgcccct ctgggtctgc gccggtgtct 541 gggtgctggc cacactcttc agcgtgccct ggctggtctt ccccgaggct gccgtctggt 601 ggtacgacct ggtcatctgc ctggacttct gggacagcga ggagctgtcg ctgaggatgc 661 tggaggtcct ggggggcttc ctgcctttcc tcctgctgct cgtctgccac gtgctcaccc 721 aggccacagc ctgtcgcacc tgccaccgcc aacagcagcc cgcagcctgc cggggcttcg 781 cccgtgtggc caggaccatt ctgtcagcct atgtggtcct gaggctgccc taccagctgg 841 cccagctgct ctacctggcc ttcctgtggg acgtctactc tggctacctg ctctgggagg 901 ccctggtcta ctccgactac ctgatcctac tcaacagctg cctcagcccc ttcctctgcc 961 tcatggccag tgccgacctc cggaccctgc tgcgctccgt gctctcgtcc ttcgcggcag 1021 ctctctgcga ggagcggccg ggcagcttca cgcccactga gccacagacc cagctagatt 1081 ctgagggtcc aactctgcca gagccgatgg cagaggccca gtcacagatg gatcctgtgg 1141 cccagcctca ggtgaacccc acactccagc cacgatcgga tcccacagct cagccacagc 1201 tgaacccTAC GGCCCAGCCA CAGTCGGATC CCACAGCCCA GCCACAGCTG AACCTCATGG 1261 CCCAGCCACA GTCAGATTCT GTGGCCCAGC CACAGGCAGA CACTAACGTC CAGACCCCTG 1321 CACCTGCTGC CAGTTCTGTG CCCAGTCCCT GTGATGAAGC TTCCCCAACC CCATCCTCGC 1381 ATCCTACCCC AGGGGCCCTT GAGGACCCAG CCACACCTCC TGCCTCTGAA GGAGAAAGCC 1441 CCAGCAGCAC CCCGCCAGAG GCGGCCCCGG GCGCAGGCCC CACGGACCCA GCTTTCTTGT 1501 ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT 1561 AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG 1621 GAAAGGACGA CTCTCCAGGT GTTGCTTATA CACAACGCGT TAAGTCgaca atcaacctct 1681 ggattacaaa atttgtgaaa gatt