Construct: ORF TRCN0000487889

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021647.1_s317c1
DNA Barcode:
CTAAGAAACCTTGGATAAATAGCC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
LIPC (3990)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000487889
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3990 LIPC lipase C, hepatic type NM_000236.3 99.7% 99.7% (many diffs)
2 human 3990 LIPC lipase C, hepatic type XM_005254372.1 99.7% 99.7% (many diffs)
3 human 3990 LIPC lipase C, hepatic type XM_024449916.1 99.7% 99.7% (many diffs)
4 human 3990 LIPC lipase C, hepatic type XM_024449917.1 99.7% 99.7% (many diffs)
5 human 3990 LIPC lipase C, hepatic type XM_005254374.4 93.7% 92.3% (many diffs)
6 human 3990 LIPC lipase C, hepatic type XM_006720502.4 90.3% 90.3% (many diffs)
7 human 3990 LIPC lipase C, hepatic type XM_017022176.1 69.6% 64.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1566
ORF length:
1497
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat ggacacaagt cccctgtgtt tctccattct gttggtttta tgcatcttta
121tccaatcaag tgcccttgga caaagcctga aaccagagcc atttggaaga agagctcaag
181ctgttgaaac aaacaaaacg ctgcatgaga tgaagaccag attcctgctc tttggagaaa
241ccaatcaggg ctgtcagatt cgaatcaatc atccggacac gttacaggag tgcggcttca
301actcctccct gcctctggtg atgataatcc acgggtggtc ggtggacggc gtgctagaaa
361actggatctg gcagatggtg gccgcgctga agtctcagcc ggcccagcca gtgaacgtgg
421ggctggtgga ctggatcacc ctggcccacg accactacac catcgccgtc cgcaacaccc
481gccttgtggg caaggaggtc gcggctcttc tccggtggct ggaggaatct gtgcaactct
541ctcgaagcca tgttcaccta attgggtaca gcctgggtgc acacgtgtca ggatttgccg
601gcagttccat cggtggaacg cacaagattg ggagaatcac agggctggat gccgcgggac
661ctttgtttga gggaagcgcc cccagcaatc gtctttctcc agatgatgcc aattttgtgg
721atgccattca tacctttacg cgggagcaca tgggcctgag cgtgggcatc aaacagccca
781taggacacta tgacttctat cccaacgggg gctccttcca gcctggctgc cacttcctag
841agctctacag acatattgcc cagcacggct tcaatgccat cacccagacc ataaaatgct
901cccacgagcg atcggtgcac cttttcatcg actccttgct gcacgccggc acgcagagca
961tggcctaccc gtgtggtgac atgaacagct tcagccaggg cctgtgcctg agctgcaaga
1021agggccgctg caacacgctg ggctaccacg tccgccagga gccgcggagc aagagcaaga
1081ggctcttcct cgtaacgcga gcccagtccc ccttcaaagt ttatcattac cagttaaaga
1141tccagttcat caaccaaact gagacgccaa tacaaacaac ttttaccatg tcactactcg
1201gaacaaaaga gaaaatgcag aaaattccca tcactctggg caaaggaatt gctagtaata
1261aaacgtattc ctttcttatc acgctGGATG TGGATATCGG CGAGCTGATC ATGATCAAGT
1321TCAAGTGGGA AAACAGTGCA GTGTGGGCCA ATGTCTGGGA CACGGTCCAG ACCATCATCC
1381CATGGAGCAC AGGGCCGCGC CACTCAGGCC TCGTTCTGAA GACGATCAGA GTCAAAGCAG
1441GAGAAACCCA GCAAAGAATG ACATTTTGTT CAGAAAACAC AGATGACCTA CTACTTCGCC
1501CAACCCAGGA AAAAATCTTC GTGAAATGTG AAATAAAGTC TAAAACATCA AAGCGAAAGA
1561TCAGATGAGA CCCAGCTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1621CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1681TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACTAAGA AACCTTGGAT AAATAGCCAC
1741GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)