Construct: ORF TRCN0000487968

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020763.1_s317c1
DNA Barcode:
TTCCTCTGCTACCCATACGGTGAC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
PROKR1 (10887)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000487968
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10887 PROKR1 prokineticin receptor 1 NM_138964.3 99.9% 100% 945G>A
2 human 128674 PROKR2 prokineticin receptor 2 NM_144773.3 82.4% 84.9% (many diffs)
3 human 128674 PROKR2 prokineticin receptor 2 XM_017027646.1 82.4% 84.9% (many diffs)
4 mouse 58182 Prokr1 prokineticin receptor 1 XM_006506433.3 58.8% 60% (many diffs)
5 mouse 246313 Prokr2 prokineticin receptor 2 XM_011239558.2 46.7% 48.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1251
ORF length:
1179
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catggagacc accatggggt tcatggatga caatgccacc aacacttcca
121ccagcttcct ttctgtgctc aaccctcatg gagcccatgc cacttccttc ccattcaact
181tcagctacag cgactatgat atgcctttgg atgaagatga ggatgtgacc aattccagga
241cgttctttgc tgccaagatt gtcattggga tggccctggt gggcatcatg ctggtctgcg
301gcattggaaa cttcatcttt atcgctgccc tggtccgcta caagaaactg cgcaacctca
361ccaacctgct catcgccaac ctggccatct ctgacttcct ggtggccatt gtctgctgcc
421cctttgagat ggactactat gtggtgcgcc agctctcctg ggagcacggc cacgtcctgt
481gcacctctgt caactacctg cgcactgtct ctctctatgt ctccaccaat gccctgctgg
541ccatcgccat tgacaggtat ctggctattg tccatccgct gagaccacgg atgaagtgcc
601aaacagccac tggcctgatt gccttggtgt ggacggtgtc catcctgatc gccatccctt
661ccgcctactt caccaccgag acggtcctcg tcattgtcaa gagccaggaa aagatcttct
721gcggccagat ctggcctgtg gaccagcagc tctactacaa gtcctacttc ctctttatct
781ttggcataga attcgtgggc cccgtggtca ccatgaccct gtgctatgcc aggatctccc
841gggagctctg gttcaaggcg gtccctggat tccagacaga gcagatccgc aagaggctgc
901gctgccgcag gaagacggtc ctggtgctca tgtgcatcct caccgcctac gtgctatgct
961gggcgcccTT CTACGGCTTC ACCATCGTGC GCGACTTCTT CCCCACCGTG TTTGTAAAGG
1021AGAAGCACTA CCTCACTGCC TTCTACATCG TCGAGTGCAT CGCCATGAGC AACAGCATGA
1081TCAACACTCT GTGCTTCGTG ACCGTCAAGA ACGACACCGT CAAGTACTTC AAAAAGATCA
1141TGTTGCTCCA CTGGAAGGCT TCTTACAATG GCGGTAAGTC CAGTGCAGAC CTGGACCTCA
1201AGACAATTGG GATGCCTGCC ACCGAAGAGG TGGACTGCAT CAGACTAAAA TAAGACCCAG
1261CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1321ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1381TATCTTGTGG AAAGGACGAT TCCTCTGCTA CCCATACGGT GACACGCGTT AAGTCgacaa
1441tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)