Construct: ORF TRCN0000487993
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019386.1_s317c1
- DNA Barcode:
- TTTGCACCAGAAATGGTCCCGAAC
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- P2RY14 (9934)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000487993
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | NM_001081455.2 | 99.9% | 99.7% | 1014_1015insG |
| 2 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | NM_014879.4 | 99.9% | 99.7% | 1014_1015insG |
| 3 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_005247922.3 | 99.9% | 99.7% | 1014_1015insG |
| 4 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_005247923.3 | 99.9% | 99.7% | 1014_1015insG |
| 5 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_011513340.3 | 99.9% | 99.7% | 1014_1015insG |
| 6 | human | 9934 | P2RY14 | purinergic receptor P2Y14 | XM_017007583.2 | 99.9% | 99.7% | 1014_1015insG |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 75
- ORF end:
- 1092
- ORF length:
- 1017
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcgc gaccatgatc aattcaacct ccacacagcc tccagatgaa tcctgctctc 121 agaacctcct gatcactcag cagatcattc ctgtgctgta ctgtatggtc ttcattgcag 181 gaatcctact caatggagtg tcaggatgga tattctttta cgtgcccagc tctaagagtt 241 tcatcatcta tctcaagaac attgttattg ctgactttgt gatgagcctg acttttcctt 301 tcaagatcct tggtgactca ggccttggtc cctggcagct gaacgtgttt gtgtgcaggg 361 tctctgccgt gctcttctac gtcaacatgt acgtcagcat tgtgttcttt gggctcatca 421 gctttgacag atattataaa attgtaaagc ctctttggac ttctttcatc cagtcagtga 481 gttacagcaa acttctgtca gtgatagtat ggatgctcat gctcctcctt gctgttccaa 541 atattattct caccaaccag agtgttaggg aggttacaca aataaaatgt atagaactga 601 aaagtgaact gggacggaag tggcacaaag catcaaacta catcttcgtg gccatcttct 661 ggattgtgtt tcttttgtta atcgttttct atactgctat cacaaagaaa atctttaagt 721 cccaccttaa gtcaagtcgg aattccactt cggtcaaaaa gaaatctagc cgcaacatat 781 tcagcatcgt gtttgtgttt tttgtctgtt ttgtacctta ccatattgcc agaaTCCCCT 841 ACACAAAGAG TCAGACCGAA GCTCATTACA GCTGCCAGTC AAAAGAAATC TTGCGGTATA 901 TGAAAGAATT CACTCTGCTA CTATCTGCTG CAAATGTATG CTTGGACCCT ATTATTTATT 961 TCTTTCTATG CCAGCCGTTT AGGGAAATCT TATGTAAGAA ATTGCACATT CCATTAAAAG 1021 CTCAGAATGA CCTAGACATT TCCAGAATCA AAAGAGGAAA TACAACACTT GAAAGCACAG 1081 ATACTTTGGA CCCAGCTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC 1141 CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA 1201 TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGATTTGCA CCAGAAATGG TCCCGAACAC 1261 GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt