Construct: ORF TRCN0000488489

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019929.1_s317c1
DNA Barcode:
CAGATGTTACAGAACTCGCAGTAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PCSK9 (255738)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488489
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 255738 PCSK9 proprotein convertase subti... NM_174936.4 75.1% 74.8% (many diffs)
2 human 255738 PCSK9 proprotein convertase subti... NR_110451.1 49.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1641
ORF length:
1572
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat gtcgccttgg aaagacggag gcagcctggt ggaggtgtat ctcctagaca
121ccagcataca gagtgaccac cgggaaatcg agggcagggt catggtcacc gacttcgaga
181atgtgcccga ggaggacggg acccgcttcc acagacaggc cagcaagtgt gacagtcatg
241gcacccacct ggcaggggtg gtcagcggcc gggatgccgg cgtggccaag ggtgccagca
301tgcgcagcct gcgcgtgctc aactgccaag ggaagggcac ggttagcggc accctcatag
361gcctggagtt tattcggaaa agccagctgg tccagcctgt ggggccactg gtggtgctgc
421tgcccctggc gggtgggtac agccgcgtcc tcaacgccgc ctgccagcgc ctggcgaggg
481ctggggtcgt gctggtcacc gctgccggca acttccggga cgatgcctgc ctctactccc
541cagcctcagc tcccgaggtc atcacagttg gggccaccaa tgcccaggac cagccggtga
601ccctggggac tttggggacc aactttggcc gctgtgtgga cctctttgcc ccaggggagg
661acatcattgg tgcctccagc gactgcagca cctgctttgt gtcacagagt gggacatcac
721aggctgctgc ccacgtggct ggcattgcag ccatgatgct gtctgccgag ccggagctca
781ccctggccga gttgaggcag agactgatcc acttctctgc caaagatgtc atcaatgagg
841cctggttccc tgaggaccag cgggtactga cccccaacct ggtggccgcc ctgcccccca
901gcacccatgg ggcaggttgg cagctgtttt gcaggactgt gtggtcagca cactcggggc
961ctacacggat ggccacagcc atcgcccgct gcgccccaga tgaggagctg ctgagctgct
1021ccagtttctc caggagtggg aagcggcggg gcgagcgcat ggaggcccaa gggggcaagc
1081tggtctgccg ggcccacaac gcttttgggg gtgagggtgt ctacgccatt gccaggtgct
1141gcctgctacc ccaggccaac tgcagcgtcc acacagctcc accagctgag gccagcatgg
1201ggacccgtgt ccactgccac caacagggcc acgtcctcac aggctgcagc tcccactggg
1261aggtggagga ccttggcacc cacaagccgc ctgtgctgag gccacgaggt cagcccaacc
1321agtgcgtggg ccacagggag gccagcatcc acgcttcctg ctgccatgcc ccaggtctgg
1381aatgcaaagt caaggagcat ggaatcccgg ccccTCAGGA GCAGGTGACC GTGGCCTGCG
1441AGGAGGGCTG GACCCTGACT GGCTGCAGTG CCCTCCCTGG GACCTCCCAC GTCCTGGGGG
1501CCTACGCCGT AGACAACACG TGTGTAGTCA GGAGCCGGGA CGTCAGCACT ACAGGCAGCA
1561CCAGCGAAGG GGCCGTGACA GCCGTTGCCA TCTGCTGCCG GAGCCGGCAC CTGGCGCAGG
1621CCTCCCAGGA GCTCCAGGAC CCAGCTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1681TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1741GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGACAGATGT TACAGAACTC
1801GCAGTAAACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)