Construct: ORF TRCN0000488567

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020917.1_s317c1
DNA Barcode:
GCGGGTATGAATTTGCGGAATCGC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
ADGRG1 (9289)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488567
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001145771.3 99.9% 99.8% 918A>C;996T>C
2 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370428.1 99.9% 99.8% 918A>C;996T>C
3 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370429.1 99.9% 99.8% 918A>C;996T>C
4 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370430.1 99.9% 99.8% 918A>C;996T>C
5 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370431.1 99.9% 99.8% 918A>C;996T>C
6 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370432.1 99.9% 99.8% 918A>C;996T>C
7 human 9289 ADGRG1 adhesion G protein-coupled ... NM_005682.7 99.9% 99.8% 918A>C;996T>C
8 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256246.2 99.9% 99.8% 918A>C;996T>C
9 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256248.2 99.9% 99.8% 918A>C;996T>C
10 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256252.2 99.9% 99.8% 918A>C;996T>C
11 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256254.2 99.9% 99.8% 918A>C;996T>C
12 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721342.2 99.9% 99.8% 918A>C;996T>C
13 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721344.2 99.9% 99.8% 918A>C;996T>C
14 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721345.3 99.9% 99.8% 918A>C;996T>C
15 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721346.2 99.9% 99.8% 918A>C;996T>C
16 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523464.2 99.9% 99.8% 918A>C;996T>C
17 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523465.2 99.9% 99.8% 918A>C;996T>C
18 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523466.2 99.9% 99.8% 918A>C;996T>C
19 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523467.2 99.9% 99.8% 918A>C;996T>C
20 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523468.2 99.9% 99.8% 918A>C;996T>C
21 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370434.1 99.7% 99.7% 918A>C;996T>C;1016_1017insGAA
22 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256237.2 99.1% 99.1% 63_77del;933A>C;1011T>C
23 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256238.2 99.1% 99.1% 63_77del;933A>C;1011T>C
24 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256239.2 99.1% 99.1% 63_77del;933A>C;1011T>C
25 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256240.4 99.1% 99.1% 63_77del;933A>C;1011T>C
26 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256241.4 99.1% 99.1% 63_77del;933A>C;1011T>C
27 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256242.4 99.1% 99.1% 63_77del;933A>C;1011T>C
28 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256244.3 99.1% 99.1% 63_77del;933A>C;1011T>C
29 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256245.2 99.1% 99.1% 63_77del;933A>C;1011T>C
30 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721338.2 99.1% 99.1% 63_77del;933A>C;1011T>C
31 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721339.4 99.1% 99.1% 63_77del;933A>C;1011T>C
32 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721340.3 99.1% 99.1% 63_77del;933A>C;1011T>C
33 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721341.2 99.1% 99.1% 63_77del;933A>C;1011T>C
34 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523461.2 99.1% 99.1% 63_77del;933A>C;1011T>C
35 human 9289 ADGRG1 adhesion G protein-coupled ... XM_011523462.2 99.1% 99.1% 63_77del;933A>C;1011T>C
36 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001145770.3 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
37 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001145772.3 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
38 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001145774.3 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
39 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370435.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
40 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370436.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
41 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370437.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
42 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370438.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
43 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370439.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
44 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370440.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
45 human 9289 ADGRG1 adhesion G protein-coupled ... NM_201524.4 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
46 human 9289 ADGRG1 adhesion G protein-coupled ... NM_201525.4 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
47 human 9289 ADGRG1 adhesion G protein-coupled ... XM_005256255.2 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
48 human 9289 ADGRG1 adhesion G protein-coupled ... XM_017023892.1 99% 98.9% 918A>C;996T>C;1283_1284insCAGGGTGCCCCTGCCGTG
49 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370441.1 98.8% 98.8% (many diffs)
50 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001145773.3 98.3% 98.2% (many diffs)
51 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370433.1 98.3% 98.2% (many diffs)
52 human 9289 ADGRG1 adhesion G protein-coupled ... XM_006721347.2 98.3% 98.2% (many diffs)
53 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370442.1 91.5% 91.4% (many diffs)
54 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001290142.2 75.3% 75.3% 104_105ins510;408A>C;486T>C
55 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001290143.2 74.6% 74.6% 0_1ins525;393A>C;471T>C
56 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001290144.2 73.7% 73.7% (many diffs)
57 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370451.1 73.7% 73.7% (many diffs)
58 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370453.1 73.7% 73.7% (many diffs)
59 human 9289 ADGRG1 adhesion G protein-coupled ... NM_001370454.1 73.7% 73.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
2151
ORF length:
2079
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgactccc cagtcgctgc tgcagacgac actgttcctg ctgagtctgc
121tcttcctggt ccaaggtgcc cacggcaggg gccacaggga agactttcgc ttctgcagcc
181agcggaacca gacacacagg agcagcctcc actacaaacc cacaccagac ctgcgcatct
241ccatcgagaa ctccgaagag gccctcacag tccatgcccc tttccctgca gcccaccctg
301cttcccgatc cttccctgac cccaggggcc tctaccactt ctgcctctac tggaaccgac
361atgctgggag attacatctt ctctatggca agcgtgactt cttgctgagt gacaaagcct
421ctagcctcct ctgcttccag caccaggagg agagcctggc tcagggcccc ccgctgttag
481ccacttctgt cacctcctgg tggagccctc agaacatcag cctgcccagt gccgccagct
541tcaccttctc cttccacagt cctccccaca cggccgctca caatgcctcg gtggacatgt
601gcgagctcaa aagggacctc cagctgctca gccagttcct gaagcatccc cagaaggcct
661caaggaggcc ctcggctgcc cccgccagcc agcagttgca gagcctggag tcgaaactga
721cctctgtgag attcatgggg gacatggtgt ccttcgagga ggaccggatc aacgccacgg
781tgtggaagct ccagcccaca gccggcctcc aggacctgca catccactcc cggcaggagg
841aggagcagag cgagatcatg gagtactcgg tgctgctgcc tcgaacactc ttccagagga
901cgaaaggccg gagcggggag gctgagaaga gactcctcct ggtggacttc agcagccaag
961ccctgttcca ggacaagaat tccagccacg tcctgggtga gaaggtcttg gggattgtgg
1021tacagaacac caaagtagcc aacctcacgg agcccgtggt gctcaccttc cagcaccagc
1081tacagccgaa gaatgtgact ctgcaatgtg tgttctgggt tgaagacccc acattgagca
1141gcccggggca ttggagcagt gctgggtgtg agaccgtcag gagagaaacc caaacatcct
1201gcttctgcaa ccacttgacc tactttgcag tgctgatggt ctcctcggtg gaggtggacg
1261ccgtgcacaa gcactacctg agcctcctct cctacgtggg ctgtgtcgtc tctgccctgg
1321cctgccttgt caccattgcc gcctacctct gctccagggt gcccctgccg tgcaggagga
1381aacctcggga ctacaccatc aaggtgcaca tgaacctgct gctggccgtc ttcctgctgg
1441acacgagctt cctgctcagc gagccggtgg ccctgacagg ctctgaggct ggctgccgag
1501ccagtgccat cttcctgcac ttctccctgc tcacctgcct ttcctggatg ggcctcgagg
1561ggtacaacct ctaccgactc gtggtggagg tctttggcac ctatgtccct ggctacctac
1621tcaagctgag cgccatgggc tggggcttcc ccatctttct ggtgacgctg gtggccctgg
1681tggatgtgga caactatggc cccatcatct tggctgtgca taggactcca gagggcgtca
1741tctacccttc catgtgctgg atccgggact ccctggtcag ctacatcacc aacctgggcc
1801TCTTCAGCCT GGTGTTTCTG TTCAACATGG CCATGCTAGC CACCATGGTG GTGCAGATCC
1861TGCGGCTGCG CCCCCACACC CAAAAGTGGT CACATGTGCT GACACTGCTG GGCCTCAGCC
1921TGGTCCTTGG CCTGCCCTGG GCCTTGATCT TCTTCTCCTT TGCTTCTGGC ACCTTCCAGC
1981TTGTCGTCCT CTACCTTTTC AGCATCATCA CCTCCTTCCA AGGCTTCCTC ATCTTCATCT
2041GGTACTGGTC CATGCGGCTG CAGGCCCGGG GTGGCCCCTC CCCTCTGAAG AGCAACTCAG
2101ACAGCGCCAG GCTCCCCATC AGCTCGGGCA GCACCTCGTC CAGCCGCATC TAGGACCCAG
2161CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
2221ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
2281TATCTTGTGG AAAGGACGAG CGGGTATGAA TTTGCGGAAT CGCACGCGTT AAGTCgacaa
2341tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)