Construct: ORF TRCN0000489077

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020314.1_s317c1
DNA Barcode:
ATGGGGTGCATTTCCAGAGTCGCA
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
TGFBR2 (7048)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489077
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7048 TGFBR2 transforming growth factor ... NM_003242.6 100% 100%
2 human 7048 TGFBR2 transforming growth factor ... NM_001024847.2 95.7% 95.6% 95_169del
3 human 7048 TGFBR2 transforming growth factor ... XM_011534043.2 94.5% 91.3% (many diffs)
4 human 7048 TGFBR2 transforming growth factor ... XM_011534045.3 93.8% 93.8% 0_1ins105
5 human 7048 TGFBR2 transforming growth factor ... XM_017007106.1 93.8% 93.8% 0_1ins105
6 mouse 21813 Tgfbr2 transforming growth factor,... NM_029575.3 87.2% 92.2% (many diffs)
7 mouse 21813 Tgfbr2 transforming growth factor,... NM_009371.3 84.1% 88.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1773
ORF length:
1701
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgggtcgg gggctgctca ggggcctgtg gccgctgcac atcgtcctgt
121ggacgcgtat cgccagcacg atcccaccgc acgttcagaa gtcggttaat aacgacatga
181tagtcactga caacaacggt gcagtcaagt ttccacaact gtgtaaattt tgtgatgtga
241gattttccac ctgtgacaac cagaaatcct gcatgagcaa ctgcagcatc acctccatct
301gtgagaagcc acaggaagtc tgtgtggctg tatggagaaa gaatgacgag aacataacac
361tagagacagt ttgccatgac cccaagctcc cctaccatga ctttattctg gaagatgctg
421cttctccaaa gtgcattatg aaggaaaaaa aaaagcctgg tgagactttc ttcatgtgtt
481cctgtagctc tgatgagtgc aatgacaaca tcatcttctc agaagaatat aacaccagca
541atcctgactt gttgctagtc atatttcaag tgacaggcat cagcctcctg ccaccactgg
601gagttgccat atctgtcatc atcatcttct actgctaccg cgttaaccgg cagcagaagc
661tgagttcaac ctgggaaacc ggcaagacgc ggaagctcat ggagttcagc gagcactgtg
721ccatcatcct ggaagatgac cgctctgaca tcagctccac gtgtgccaac aacatcaacc
781acaacacaga gctgctgccc attgagctgg acaccctggt ggggaaaggt cgctttgctg
841aggtctataa ggccaagctg aagcagaaca cttcagagca gtttgagaca gtggcagtca
901agatctttcc ctatgaggag tatgcctctt ggaagacaga gaaggacatc ttctcagaca
961tcaatctgaa gcatgagaac atactccagt tcctgacggc tgaggagcgg aagacggagt
1021tggggaaaca atactggctg atcaccgcct tccacgccaa gggcaaccta caggagtacc
1081tgacgcggca tgtcatcagc tgggaggacc tgcgcaagct gggcagctcc ctcgcccggg
1141ggattgctca cctccacagt gatcacactc catgtgggag gcccaagatg cccatcgtgc
1201acagggacct caagagctcc aatatcctcg tgaagaacga cctaacctgc tgcctgtgtg
1261actttgggct ttccctgcgt ctggacccta ctctgtctgt ggatgacctg gctaacagtg
1321ggcaggtggg aactgcaaga tacatggctc cagaagtcct agaatccagg atgaatttgg
1381agaatgttga gtccttcaag cagaccgatg tctactccat ggcTCTGGTG CTCTGGGAAA
1441TGACATCTCG CTGTAATGCA GTGGGAGAAG TAAAAGATTA TGAGCCTCCA TTTGGTTCCA
1501AGGTGCGGGA GCACCCCTGT GTCGAAAGCA TGAAGGACAA CGTGTTGAGA GATCGAGGGC
1561GACCAGAAAT TCCCAGCTTC TGGCTCAACC ACCAGGGCAT CCAGATGGTG TGTGAGACGT
1621TGACTGAGTG CTGGGACCAC GACCCAGAGG CCCGTCTCAC AGCCCAGTGT GTGGCAGAAC
1681GCTTCAGTGA GCTGGAGCAT CTGGACAGGC TCTCGGGGAG GAGCTGCTCG GAGGAGAAGA
1741TTCCTGAAGA CGGCTCCCTA AACACTACCA AATGAGACCC AGCTTTCTTG TACAAAGTGG
1801TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1861CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1921AATGGGGTGC ATTTCCAGAG TCGCAACGCG TTAAGTCgac aatcaacctc tggattacaa
1981aatttgtgaa agatt

Download FASTA (ORF) (Full)

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