Construct: ORF TRCN0000491556

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006365.1_s317c1
Derived from:
ccsbBroadEn_07560
DNA Barcode:
CGATCATATGACCGTTTTGCTACG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM12 (10137)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491556
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10137 RBM12 RNA binding motif protein 12 NM_001198838.2 99.9% 100% 228G>A
2 human 10137 RBM12 RNA binding motif protein 12 NM_001198840.2 99.9% 100% 228G>A
3 human 10137 RBM12 RNA binding motif protein 12 NM_006047.6 99.9% 100% 228G>A
4 human 10137 RBM12 RNA binding motif protein 12 NM_152838.4 99.9% 100% 228G>A
5 mouse 75710 Rbm12 RNA binding motif protein 12 NM_029397.3 84.7% 86.7% (many diffs)
6 mouse 75710 Rbm12 RNA binding motif protein 12 NM_170598.2 84.7% 86.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2862
ORF length:
2796
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc tgtggtcatc cgtttgcaag gtctcccaat tgtggcgggg accatggaca
121ttcgccactt cttctctgga ttgaccattc ctgatggggg cgtgcatatt gtagggggtg
181aactgggtga ggctttcatc gtttttgcca ctgatgaaga tgcaaggctt ggtatgatgc
241gcacaggtgg tacaattaaa gggtcaaaag taacactatt gttgagtagt aaaacggaaa
301tgcagaatat gattgaactg agtcgtaggc gttttgaaac tgccaactta gatataccac
361cagcaaatgc cagtagatca ggaccaccac ctagctcagg aatgagtagc agggtaaact
421tgcccacaac agtatccaac tttaataatc catcacccag tgtagttact gccaccactt
481ctgttcatga aagcaacaaa aacatacaga cattttccac agccagcgta ggaacagctc
541ctccaaatat gggggcttcc tttgggagcc caacgtttag ctcaactgtt ccaagcacag
601cctctccaat gaacacagtc ccgccgccac caattcctcc aattccagcg atgccatctc
661tgccaccaat gccatccatt cccccaattc cagttcctcc tccagtacct acattgcctc
721ctgtgcctcc tgtgcccccg attcccccag ttccttctgt gccacccatg accccactgc
781cacccatgtc gggcatgccg cccttgaatc cgccacctgt ggcacctcta cctgctggaa
841tgaatggctc tggagcacct atgaatttga acaataatct gaatcctatg tttcttggtc
901cgttgaatcc tgttaaccct atccagatga actctcagag cagtgtgaag ccactcccca
961tcaaccctga tgatctgtat gtcagtgtgc atggaatgcc cttttctgca atggaaaatg
1021atgtcagaga tttttttcat gggctccgtg ttgatgcagt gcatttgttg aaagatcatg
1081taggtcgaaa taatgggaat ggattggtta agtttctctc ccctcaagat acatttgaag
1141ctttgaaacg aaacagaatg ctgatgattc aacgctatgt ggaagttagc cctgccacag
1201aaagacagtg ggtagctgct ggaggccata tcacttttaa gcaaaatatg ggaccttctg
1261gacaaactca tccccctcct cagacacttc ccaggtcaaa atcgcccagt gggcagaaaa
1321gatcaaggtc aagatcacca catgaggctg gtttttgtgt ttacttgaaa gggctaccat
1381ttgaagcaga aaacaaacat gtcattgatt tttttaaaaa gctggatatt gtggaagata
1441gtatttatat agcttatgga cccaatggga aagcaactgg cgaaggcttt gtagagttca
1501gaaatgaggc tgactataag gctgctctgt gtcgtcataa acagtacatg ggcaatcgct
1561ttattcaagt tcatccaatt actaagaaag gtatgctaga aaagatagat atgattcgaa
1621aaagactgca gaacttcagc tatgaccaga gggaaatgat actaaatcca gagggggatg
1681tcaactctgc caaagtctgt gcccacataa caaatattcc attcagcatt acaaagatgg
1741atgttcttca gttcctagaa ggaatcccag tggatgaaaa tgctgtacat gttcttgttg
1801ataacaatgg gcaaggtcta ggacaggcat tggttcagtt taaaaatgaa gatgatgcac
1861gtaagtctga acgcttacac cgtaaaaaac ttaatgggag agaagctttt gttcatgtag
1921ttaccctaga agatatgaga gagattgaga aaaatccccc tgcccaagga aaaaagggat
1981taaagatgcc tgtgccaggt aatcctgcag ttccaggaat gcccaatgcg ggactgcccg
2041gtgtgggact gcccagtgca ggacttcccg gtgcaggcct gcccagcaca ggactgcctg
2101gttcagcaat aaccagtgca ggactgcctg gtgcgggaat gcccagtgca ggaataccta
2161gtgcaggagg tgaagagcat gccttcctga ctgtaggatc aaaggaagcc aataatgggc
2221ctccatttaa ctttcctggt aattttggtg gatcaaatgc ctttgggcca ccaatccctc
2281ctccaggatt aggaggcggg gcctttggtg atgctaggcc tggtatgcct tcagttggaa
2341acagtggttt gcctggtcta ggactggatg ttccgggttt tggaggtgga ccaaacaatt
2401taagtgggcc atcgggattt ggagggggcc ctcagaattt tggaaatggc cctggtagct
2461taggcggtcc cccggggttt ggaagtggcc ctcctggtct tGGAAGTGCC CCTGGGCATT
2521TGGGTGGGCC ACCAGCTTTT GGGCCTGGCC CCGGCCCCGG CCCCGGCCCT GGCCCAATCC
2581ATATTGGTGG TCCCCCTGGC TTTGCATCTA GTTCTGGAAA ACCAGGACCG ACAGTAATTA
2641AAGTGCAAAA CATGCCCTTT ACTGTGTCTA TTGATGAGAT TTTAGATTTC TTTTATGGCT
2701ATCAAGTAAT CCCAGGCTCA GTGTGTTTAA AATACAATGA AAAAGGTATG CCCACAGGTG
2761AAGCCATGGT GGCCTTTGAG TCTCGGGATG AAGCCACAGC TGCTGTCATT GACTTAAATG
2821ACAGGCCTAT AGGTTCAAGA AAAGTAAAAC TTGTATTAGG GTACCCAACT TTCTTGTACA
2881AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
2941AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
3001AGGACGACGA TCATATGACC GTTTTGCTAC GACGCGTTAA GTCgacaatc aacctctgga
3061ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)