Construct: ORF TRCN0000491595

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008566.2_s317c1
Derived from:
ccsbBroadEn_00323
DNA Barcode:
AGCTTAGACTTGATGCCTCACACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CLU (1191)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491595
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1191 CLU clusterin NM_001831.4 100% 100%
2 human 1191 CLU clusterin XM_006716284.3 89.6% 89.6% 1_156del
3 human 1191 CLU clusterin NR_045494.1 46.9% 1_180del;1528_2871del
4 human 1191 CLU clusterin NR_038335.1 44.7% 1_321del;1669_3012del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1413
ORF length:
1347
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgat gaagactctg ctgctgtttg tggggctgct gctgacctgg gagagtgggc
121aggtcctggg ggaccagacg gtctcagaca atgagctcca ggaaatgtcc aatcagggaa
181gtaagtacgt caataaggaa attcaaaatg ctgtcaacgg ggtgaaacag ataaagactc
241tcatagaaaa aacaaacgaa gagcgcaaga cactgctcag caacctagaa gaagccaaga
301agaagaaaga ggatgcccta aatgagacca gggaatcaga gacaaagctg aaggagctcc
361caggagtgtg caatgagacc atgatggccc tctgggaaga gtgtaagccc tgcctgaaac
421agacctgcat gaagttctac gcacgcgtct gcagaagtgg ctcaggcctg gttggccgcc
481agcttgagga gttcctgaac cagagctcgc ccttctactt ctggatgaat ggtgaccgca
541tcgactccct gctggagaac gaccggcagc agacgcacat gctggatgtc atgcaggacc
601acttcagccg cgcgtccagc atcatagacg agctcttcca ggacaggttc ttcacccggg
661agccccagga tacctaccac tacctgccct tcagcctgcc ccaccggagg cctcacttct
721tctttcccaa gtcccgcatc gtccgcagct tgatgccctt ctctccgtac gagcccctga
781acttccacgc catgttccag cccttccttg agatgataca cgaggctcag caggccatgg
841acatccactt ccatagcccg gccttccagc acccgccaac agaattcata cgagaaggcg
901acgatgaccg gactgtgtgc cgggagatcc gccacaactc cacgggctgc ctgcggatga
961aggaccagtg tgacaagtgc cgggagatct tgtctgtgga ctgttccacc aacaacccct
1021cccaggctaa gctgcggcgg gagctcgacg aatccctcca ggtcgctgag aggttGACCA
1081GGAAATACAA CGAGCTGCTA AAGTCCTACC AGTGGAAGAT GCTCAACACC TCCTCCTTGC
1141TGGAGCAGCT GAACGAGCAG TTTAACTGGG TGTCCCGGCT GGCAAACCTC ACGCAAGGCG
1201AAGACCAGTA CTATCTGCGG GTCACCACGG TGGCTTCCCA CACTTCTGAC TCGGACGTTC
1261CTTCCGGTGT CACTGAGGTG GTCGTGAAGC TCTTTGACTC TGATCCCATC ACTGTGACGG
1321TCCCTGTAGA AGTCTCCAGG AAGAACCCTA AATTTATGGA GACCGTGGCG GAGAAAGCGC
1381TGCAGGAATA CCGCAAAAAG CACCGGGAGG AGTGCCCAAC TTTCTTGTAC AAAGTGGTTG
1441ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1501GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGAAG
1561CTTAGACTTG ATGCCTCACA CCACGCGTTA AGTCgacaat caacctctgg attacaaaat
1621ttgtgaaaga tt

Download FASTA (ORF) (Full)