Construct: ORF TRCN0000491689
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF020636.2_s317c1
- DNA Barcode:
- AGGCTTCGAATTACTGCTTCCCAA
- Epitope Tag:
- V5 (not translated due to prior stop codon)
- Notes:
- Has stop codon in insert
Originally Annotated References:
- Gene:
- MERTK (10461)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000491689
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 10461 | MERTK | MER proto-oncogene, tyrosin... | NM_006343.3 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 72
- ORF end:
- 3069
- ORF length:
- 2997
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcac catggggccg gccccgctgc cgctgctgct gggcctcttc ctccccgcgc 121 tctggcgtag agctatcact gaggcaaggg aagaagccaa gccttacccg ctattcccgg 181 gaccttttcc agggagcctg caaactgacc acacaccgct gttatccctt cctcacgcca 241 gtgggtacca gcctgccttg atgttttcac caacccagcc tggaagacca catacaggaa 301 acgtagccat tccccaggtg acctctgtcg aatcaaagcc cctaccgcct cttgccttca 361 aacacacagt tggacacata atactttctg aacataaagg tgtcaaattt aattgctcaa 421 tcagtgtacc taatatatac caggacacca caatttcttg gtggaaagat gggaaggaat 481 tgcttggggc acatcatgca attacacagt tttatccaga tgatgaagtt acagcaataa 541 tcgcttcctt cagcataacc agtgtgcagc gttcagacaa tgggtcgtat atctgtaaga 601 tgaaaataaa caatgaagag atcgtgtctg atcccatcta catcgaagta caaggacttc 661 ctcactttac taagcagcct gagagcatga atgtcaccag aaacacagcc ttcaacctca 721 cctgtcaggc tgtgggcccg cctgagcccg tcaacatttt ctgggttcaa aacagtagcc 781 gtgttaacga acagcctgaa aaatccccct ccgtgctaac tgttccaggc ctgacggaga 841 tggcggtctt cagttgtgag gcccacaatg acaaagggct gaccgtgtcc aagggagtgc 901 agatcaacat caaagcaatt ccctccccac caactgaagt cagcatccgt aacagcactg 961 cacacagcat tctgatctcc tgggttcctg gttttgatgg atactccccg ttcaggaatt 1021 gcagcattca ggtcaaggaa gctgatccgc tgagtaatgg ctcagtcatg atttttaaca 1081 cctctgcctt accacatctg taccaaatca agcagctgca agccctggct aattacagca 1141 ttggtgtttc ctgcatgaat gaaataggct ggtctgcagt gagcccttgg attctagcca 1201 gcacgactga aggagcccca tcagtagcac ctttaaatgt cactgtgttt ctgaatgaat 1261 ctagtgataa tgtggacatc agatggatga agcctccgac taagcagcag gatggagaac 1321 tggtgggcta ccggatatcc cacgtgtggc agagtgcagg gatttccaaa gagctcttgg 1381 aggaagttgg ccagaatggc agccgagctc ggatctctgt tcaagtccac aatgctacgt 1441 gcacagtgag gattgcagcc gtcaccagag ggggagttgg gcccttcagt gatccagtga 1501 aaatatttat ccctgcacac ggttgggtag attatgcccc ctcttcaact ccggcgcctg 1561 gcaacgcaga tcctgtgctc atcatctttg gctgcttttg tggatttatt ttgattgggt 1621 tgattttata catctccttg gccatcagaa aaagagtcca ggagacaaag tttgggaatg 1681 cattcacaga ggaggattct gaattagtgg tgaattatat agcaaagaaa tccttctgtc 1741 ggcgagccat tgaacttacc ttacatagct tgggagtcag tgaggaacta caaaataaac 1801 tagaagatgt tgtgattgac aggaatcttc taattcttgg aaaaattctg ggtgaaggag 1861 agtttgggtc tgtaatggaa ggaaatctta agcaggaaga tgggacctct ctgaaagtgg 1921 cagtgaagac catgaagttg gacaactctt cacagcggga gatcgaggag tttctcagtg 1981 aggcagcgtg catgaaagac ttcagccacc caaatgtcat tcgacttcta ggtgtgtgta 2041 tagaaatgag ctctcaaggc atcccaaagc ccatggtaat tttacccttc atgaaatacg 2101 gggacctgca tacttactta ctttattccc gattggagac aggaccaaag catattcctc 2161 tgcagacact attgaagttc atggtggata ttgccctggg aatggagtat ctgagcaaca 2221 ggaattttct tcatcgagat ttagctgctc gaaactgcat gttgcgagat gacatgactg 2281 tctgtgttgc ggacttcggc ctctctaaga agatttacag tggcgattat taccgccaag 2341 gccgcattgc taagatgcct gttaaatgga tcgccataga aagtcttgca gaccgagtct 2401 acacaagtaa aagtgatgtg tgggcatttg gcgtgaccat gtgggaaata gctacgcggg 2461 gaatgactcc ctatcctggg gtccagaacc atgagatgta tgactatctt ctccatggcc 2521 acaggttgaa gcagcccgaa gactgcctgg atgaactgta tgaaataatg tactcttgct 2581 ggagaaccga tcccttagac cgccccacct tttcagtatt gaggctgcag ctagaaaaac 2641 tcttagaaag tttgcctgac gttcggaacc aagcagacgt tatttacgtc aatacacagt 2701 tgctggagag ctctgagggc ctggcccagg gctccaccct tgctccactg gacttgaaca 2761 tcgaccctga ctctataatt gcctcctgCA CTCCCCGCGC TGCCATCAGT GTGGTCACAG 2821 CAGAAGTTCA TGACAGCAAA CCTCATGAAG GACGGTACAT CCTGAATGGG GGCAGTGAGG 2881 AATGGGAAGA TCTGACTTCT GCCCCCTCTG CTGCAGTCAC AGCTGAAAAG AACAGTGTTT 2941 TACCGGGGGA GAGACTTGTT AGGAATGGGG TCTCCTGGTC CCATTCGAGC ATGCTGCCCT 3001 TGGGAAGCTC ATTGCCCGAT GAACTTTTGT TTGCTGACGA CTCCTCAGAA GGCTCAGAAG 3061 TCCTGATGTG AGACCCAGCT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA 3121 ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT 3181 CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGAAGG CTTCGAATTA CTGCTTCCCA 3241 AACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t