Construct: ORF TRCN0000491969

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006019.2_s317c1
Derived from:
ccsbBroadEn_07804
DNA Barcode:
CTATTCAATCGCCAATAGCAGCTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAJC8 (22826)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000491969
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22826 DNAJC8 DnaJ heat shock protein fam... NM_014280.3 99.8% 100% 552G>A
2 human 22826 DNAJC8 DnaJ heat shock protein fam... NR_159454.1 40.2% (many diffs)
3 mouse 68598 Dnajc8 DnaJ heat shock protein fam... NM_172400.3 90.9% 99.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
825
ORF length:
759
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ggcttcagga gagagcggga cttcaggcgg cggaggcagc accgaggaag
121catttatgac cttctacagt gaggtgaaac aaatagagaa gagagactcg gttctaactt
181cgaaaaatca gattgaaaga ctgacccgtc ctggttcctc ttacttcaat ttgaacccat
241ttgaggttct tcagatagat cctgaagtta cagatgaaga aataaaaaag aggtttcggc
301agttatccat cttggtgcat cctgacaaaa atcaagatga tgctgacaga gcacaaaagg
361cttttgaagc tgtggacaaa gcttacaagt tgctactgga tcaggagcaa aagaagaggg
421ccctggatgt aattcaggca ggaaaagaat acgtggaaca cactgtgaaa gagcgaaaaa
481aacaattaaa gaaggaagga aaacctacaa ttgtagagga ggatgatcct gagctgttca
541aacaagctgt atataaacag acaatgaaac tctttgcaga gctggaaatt aaaaggaaag
601agagagaagc caaagaaatg catgaaagga aacgacaaag ggaagAAGAG ATTGAAGCTC
661AAGAAAAAGC CAAACGGGAA AGAGAGTGGC AGAAAAACTT TGAGGAAAGT CGAGATGGTC
721GTGTGGACAG CTGGCGAAAC TTCCAAGCCA ATACGAAGGG GAAGAAAGAG AAGAAAAATC
781GGACCTTCCT GAGACCACCG AAAGTAAAAA TGGAGCAACG TGAGTGCCCA ACTTTCTTGT
841ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
901AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
961GAAAGGACGA CTATTCAATC GCCAATAGCA GCTTACGCGT TAAGTCgaca atcaacctct
1021ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)