Construct: ORF ccsbBroad304_00532

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007881.1_s304c1, BRDN0000408643
Derived from:
ccsbBroadEn_00532
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
F11 (2160)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00532
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2160 F11 coagulation factor XI NM_000128.4 100% 100%
2 human 2160 F11 coagulation factor XI XM_005262821.4 99.8% 99.6% 1029_1031delCAG
3 human 2160 F11 coagulation factor XI XM_006714137.3 97.2% 97.1% 863_864ins48;981_983delCAG
4 human 2160 F11 coagulation factor XI XM_005262822.4 94.7% 94.5% 1029_1031delCAG;1481_1482ins96
5 human 2160 F11 coagulation factor XI XM_005262823.4 85.4% 85.3% 484_485ins270;759_761delCAG
6 human 2160 F11 coagulation factor XI XR_001741172.2 66.5% (many diffs)
7 human 2160 F11 coagulation factor XI XM_017007886.2 61.6% 61.2% (many diffs)
8 human 2160 F11 coagulation factor XI XM_017007884.2 61.5% 61% (many diffs)
9 human 2160 F11 coagulation factor XI XM_017007885.2 61.5% 61% (many diffs)
10 human 2160 F11 coagulation factor XI NM_001354804.2 25.8% 25.9% 486_486delGins1390
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1944
ORF length:
1875
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gattttctta tatcaagtgg tacatttcat tttatttact tcagtttctg
121gtgaatgtgt gactcagttg ttgaaggaca cctgctttga aggaggggac attactacgg
181tcttcacacc aagcgccaag tactgccagg tagtctgcac ttaccaccca agatgtttac
241tcttcacttt cacggcggaa tcaccatctg aggatcccac ccgatggttt acttgtgtcc
301tgaaagacag tgttacagaa acactgccaa gagtgaatag gacagcagcg atttctgggt
361attctttcaa gcaatgctca caccaaataa gcgcttgcaa caaagacatt tatgtggacc
421tagacatgaa gggcataaac tataacagct cagttgccaa gagtgctcaa gaatgccaag
481aaagatgcac ggatgacgtc cactgccact ttttcacgta cgccacaagg cagtttccca
541gcctggagca tcgtaacatt tgtctactga agcacaccca aacagggaca ccaaccagaa
601taacgaagct cgataaagtg gtgtctggat tttcactgaa atcctgtgca ctttctaatc
661tggcttgtat tagggacatt ttccctaata cggtgtttgc agacagcaac atcgacagtg
721tcatggctcc cgatgctttt gtctgtggcc gaatctgcac tcatcatccc ggttgcttgt
781tttttacctt cttttcccag gaatggccca aagaatctca aagaaatctt tgtctcctta
841aaacatctga gagtggattg cccagtacac gcattaaaaa gagcaaagct ctttctggtt
901tcagtctaca aagctgcagg cacagcatcc cagtgttctg ccattcttca ttttaccatg
961acactgattt cttgggagaa gaactggata ttgttgctgc aaaaagtcac gaggcctgcc
1021agaaactgtg caccaatgcc gtccgctgcc agttttttac ctatacccca gcccaagcat
1081cctgcaacga agggaagggc aagtgttact taaagctttc ttcaaacgga tctccaacta
1141aaatacttca cgggagagga ggcatctctg gatacacatt aaggttgtgt aaaatggata
1201atgagtgtac caccaaaatc aagcccagga tcgttggagg aactgcgtct gttcgtggtg
1261agtggccgtg gcaggtgacc ctgcacacaa cctcacccac tcagagacac ctgtgtggag
1321gctccatcat tggaaaccag tggatattaa cagccgctca ctgtttctat ggggtagagt
1381cacctaagat tttgcgtgtc tacagtggca ttttaaatca atctgaaata aaagaggaca
1441catctttctt tggggttcaa gaaataataa tccatgatca gtataaaatg gcagaaagcg
1501ggtatgatat tgccttgttg aaactggaaa ccacagtgaa ttacacagat tctcaacgac
1561ccatatgcct gccttccaaa ggagatagaa atgtaatata cactgattgc tgggtgactg
1621gatgggggta cagaaaacta agagacaaaa tacaaaatac tctccagaaa gccaagatac
1681ccttagtgac caacgaagag tgccagaaga gatacagagg acataaaata acccataaga
1741tgatctgtgc cggctacagg gaaggaggga aggacgcttg caagggagat tcgggaggcc
1801ctctgtcctg caaacacaat gaggtctggc atctggtagg catcacgagc tggggcgaag
1861gctgtgctca aagggagcgg ccaggtgttt acaccaacgt ggtcgagtac gtggactgga
1921ttctggagaa aactcaagca gtgttgccaa ctttcttgta caaagtggtt ggtaagccta
1981tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
2041gcgttaagtc gacaatcaac ctctggatta

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