Construct: ORF ccsbBroad304_01127

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001374.1_s304c1, BRDN0000461158
Derived from:
ccsbBroadEn_01127
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OTC (5009)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01127
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5009 OTC ornithine carbamoyltransferase NM_000531.6 100% 100%
2 human 5009 OTC ornithine carbamoyltransferase XM_017029556.1 84.2% 83.6% (many diffs)
3 mouse 18416 Otc ornithine transcarbamylase NM_008769.4 89.1% 92.6% (many diffs)
4 mouse 18416 Otc ornithine transcarbamylase XM_011247449.2 85.8% 88.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1131
ORF length:
1062
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gctgtttaat ctgaggatcc tgttaaacaa tgcagctttt agaaatggtc
121acaacttcat ggttcgaaat tttcggtgtg gacaaccact acaaaataaa gtgcagctga
181agggccgtga ccttctcact ctaaaaaact ttaccggaga agaaattaaa tatatgctat
241ggctatcagc agatctgaaa tttaggataa aacagaaagg agagtatttg cctttattgc
301aagggaagtc cttaggcatg atttttgaga aaagaagtac tcgaacaaga ttgtctacag
361aaacaggctt tgcacttctg ggaggacatc cttgttttct taccacacaa gatattcatt
421tgggtgtgaa tgaaagtctc acggacacgg cccgtgtatt gtctagcatg gcagatgcag
481tattggctcg agtgtataaa caatcagatt tggacaccct ggctaaagaa gcatccatcc
541caattatcaa tgggctgtca gatttgtacc atcctatcca gatcctggct gattacctca
601cgctccagga acactatagc tctctgaaag gtcttaccct cagctggatc ggggatggga
661acaatatcct gcactccatc atgatgagcg cagcgaaatt cggaatgcac cttcaggcag
721ctactccaaa gggttatgag ccggatgcta gtgtaaccaa gttggcagag cagtatgcca
781aagagaatgg taccaagctg ttgctgacaa atgatccatt ggaagcagcg catggaggca
841atgtattaat tacagacact tggataagca tgggacaaga agaggagaag aaaaagcggc
901tccaggcttt ccaaggttac caggttacaa tgaagactgc taaagttgct gcctctgact
961ggacattttt acactgcttg cccagaaagc cagaagaagt ggatgatgaa gtcttttatt
1021ctcctcgatc actagtgttc ccagaggcag aaaacagaaa gtggacaatc atggctgtca
1081tggtgtccct gctgacagat tactcacctc agctccagaa gcctaaattt ttgccaactt
1141tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1201agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)