Construct: ORF ccsbBroad304_01636

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009337.1_s304c1, BRDN0000461231
Derived from:
ccsbBroadEn_01636
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TACR1 (6869)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01636
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6869 TACR1 tachykinin receptor 1 NM_001058.4 100% 100%
2 human 6869 TACR1 tachykinin receptor 1 NM_015727.3 76.4% 76.4% 933_934ins288
3 mouse 21336 Tacr1 tachykinin receptor 1 NM_009313.5 89.7% 94.5% (many diffs)
4 mouse 21336 Tacr1 tachykinin receptor 1 XM_006505863.3 89.7% 94.5% (many diffs)
5 mouse 21336 Tacr1 tachykinin receptor 1 XM_006505864.3 89.7% 94.5% (many diffs)
6 mouse 21336 Tacr1 tachykinin receptor 1 XM_006505865.3 89.7% 94.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1290
ORF length:
1221
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggataacgtc ctcccggtgg actcagacct ctccccaaac atctccacta
121acacctcgga acccaatcag ttcgtgcaac cagcctggca aattgtcctt tgggcagctg
181cctacacggt cattgtggtg acctctgtgg tgggcaacgt ggtagtgatg tggatcatct
241tagcccacaa aagaatgagg acagtgacga actattttct ggtgaacctg gccttcgcgg
301aggcctccat ggctgcattc aatacagtgg tgaacttcac ctatgctgtc cacaacgaat
361ggtactacgg cctgttctac tgcaagttcc acaacttctt tcccatcgcc gctgtcttcg
421ccagtatcta ctccatgacg gctgtggcct ttgataggta catggccatc atacatcccc
481tccagccccg gctgtcagcc acagccacca aagtggtcat ctgtgtcatc tgggtcctgg
541ctctcctgct ggccttcccc cagggctact actcaaccac agagaccatg cccagcagag
601tcgtgtgcat gatcgaatgg ccagagcatc cgaacaagat ttatgagaaa gtgtaccaca
661tctgtgtgac tgtgctgatc tacttcctcc ccctgctggt gattggctat gcatacaccg
721tagtgggaat cacactatgg gccagtgaga tccccgggga ctcctctgac cgctaccacg
781agcaagtctc tgccaagcgc aaggtggtca aaatgatgat tgtcgtggtg tgcaccttcg
841ccatctgctg gctgcccttc cacatcttct tcctcctgcc ctacatcaac ccagatctct
901acctgaagaa gtttatccag caggtctacc tggccatcat gtggctggcc atgagctcca
961ccatgtacaa ccccatcatc tactgctgcc tcaatgacag gttccgtctg ggcttcaagc
1021atgccttccg gtgctgcccc ttcatcagcg ccggcgacta tgaggggctg gaaatgaaat
1081ccacccggta tctccagacc cagggcagtg tgtacaaagt cagccgcctg gagaccacca
1141tctccacagt ggtgggggcc cacgaggagg agccagagga cggccccaag gccacaccct
1201cgtccctgga cctgacctcc aactgctctt cacgaagtga ctccaagacc atgacagaga
1261gcttcagctt ctcctccaat gtgctctcct tgccaacttt cttgtacaaa gtggttggta
1321agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1381ggtggcgcgt taagtcgaca atcaacctct ggatta

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