Construct: ORF ccsbBroad304_01711

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005455.1_s304c1, BRDN0000412127
Derived from:
ccsbBroadEn_01711
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TRHR (7201)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01711
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7201 TRHR thyrotropin releasing hormo... NM_003301.6 100% 100%
2 mouse 22045 Trhr thyrotropin releasing hormo... XM_006520747.1 90.2% 94.4% (many diffs)
3 mouse 22045 Trhr thyrotropin releasing hormo... NM_013696.2 89.2% 93.2% (many diffs)
4 mouse 22045 Trhr thyrotropin releasing hormo... XM_006520748.2 59.7% 62% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1263
ORF length:
1194
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggaaaacgag acagtcagtg aactgaacca aacacagctt cagccacgag
121cagtggtggc cttagaatac caggtggtca ccatcttact tgtactcatt atttgtggcc
181tgggcattgt aggcaacatc atggtagtcc tggttgtcat gagaaccaag cacatgagga
241cccccacaaa ctgctacctg gtgagcctgg cagtagctga tctcatggtc ttggtggccg
301caggcctccc caacataaca gacagtatct acggttcctg ggtctatggc tatgttggat
361gcctctgcat tacttacctc cagtatttgg gaattaatgc atcctcttgt tcaataacag
421cctttaccat tgagaggtac atagcaatct gtcaccccat caaagcccag tttctctgca
481cattttccag agccaaaaag attatcatct ttgtctgggc tttcacatct ctttactgta
541tgctctggtt cttcttgctg gatctcaata ttagcaccta caaagatgct attgtgatat
601cctgtggcta caagatctcc aggaattact actcacctat ttacctaatg gactttggtg
661tcttttatgt tgtgccaatg atcctggcta ccgtcctcta tggattcata gctagaatcc
721ttttcttaaa tcccattcct tcagatccta aagaaaactc taagacatgg aaaaatgatt
781caacccatca gaacacaaat ctgaatgtaa atacctctaa tagatgtttc aacagcacag
841tatcttcaag gaagcaggtc accaagatgc tggcagtggt tgtaattctg tttgcccttt
901tatggatgcc ctacaggact ctagtggttg tcaactcatt tctctccagt cctttccaag
961aaaattggtt tttgctcttt tgcagaattt gcatttatct caacagtgcc atcaacccgg
1021tgatttacaa tctcatgtcc cagaaattcc gtgcagcctt cagaaagctc tgcaactgca
1081agcagaagcc aacagagaaa cctgctaact acagtgtggc cctaaattac agcgtcatca
1141aggagtcaga ccatttcagc acagagcttg atgatatcac tgtcactgac acttacctgt
1201ctgccacaaa agtgtctttt gatgacacct gcttggcttc tgaggtatcc tttagccaaa
1261gtttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1321tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1381tctggatta

Download FASTA (ORF) (Full)