Construct: ORF ccsbBroad304_01787

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012228.1_s304c1, BRDN0000400716
Derived from:
ccsbBroadEn_01787
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
YES1 (7525)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01787
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7525 YES1 YES proto-oncogene 1, Src f... NM_005433.4 99.9% 100% 1444T>C
2 human 7525 YES1 YES proto-oncogene 1, Src f... XM_017025960.2 99.9% 100% 1444T>C
3 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451243.1 99.9% 100% 1444T>C
4 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451244.1 99.9% 100% 1444T>C
5 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451245.1 99.9% 100% 1444T>C
6 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451246.1 99.9% 100% 1444T>C
7 human 7525 YES1 YES proto-oncogene 1, Src f... XM_005258139.4 91.8% 91.8% 1289_1290ins132;1312T>C
8 human 7525 YES1 YES proto-oncogene 1, Src f... XM_024451247.1 91.8% 91.8% 1289_1290ins132;1312T>C
9 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_001205132.1 91.1% 95.9% (many diffs)
10 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_001205133.1 91.1% 95.9% (many diffs)
11 mouse 22612 Yes1 YES proto-oncogene 1, Src f... NM_009535.3 91.1% 95.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1695
ORF length:
1629
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ctgcattaaa agtaaagaaa acaaaagtcc agccattaaa tacagacctg
121aaaatactcc agagcctgtc agtacaagtg tgagccatta tggagcagaa cccactacag
181tgtcaccatg tccgtcatct tcagcaaagg gaacagcagt taatttcagc agtctttcca
241tgacaccatt tggaggatcc tcaggggtaa cgccttttgg aggtgcatct tcctcatttt
301cagtggtgcc aagttcatat cctgctggtt taacaggtgg tgttactata tttgtggcct
361tatatgatta tgaagctaga actacagaag acctttcatt taagaagggt gaaagatttc
421aaataattaa caatacggaa ggagattggt gggaagcaag atcaatcgct acaggaaaga
481atggttatat cccgagcaat tatgtagcgc ctgcagattc cattcaggca gaagaatggt
541attttggcaa aatggggaga aaagatgctg aaagattact tttgaatcct ggaaatcaac
601gaggtatttt cttagtaaga gagagtgaaa caactaaagg tgcttattcc ctttctattc
661gtgattggga tgagataagg ggtgacaatg tgaaacacta caaaattagg aaacttgaca
721atggtggata ctatatcaca accagagcac aatttgatac tctgcagaaa ttggtgaaac
781actacacaga acatgctgat ggtttatgcc acaagttgac aactgtgtgt ccaactgtga
841aacctcagac tcaaggtcta gcaaaagatg cttgggaaat ccctcgagaa tctttgcgac
901tagaggttaa actaggacaa ggatgtttcg gcgaagtgtg gatgggaaca tggaatggaa
961ccacgaaagt agcaatcaaa acactaaaac caggtacaat gatgccagaa gctttccttc
1021aagaagctca gataatgaaa aaattaagac atgataaact tgttccacta tatgctgttg
1081tttctgaaga accaatttac attgtcactg aatttatgtc aaaaggaagc ttattagatt
1141tccttaagga aggagatgga aagtatttga agcttccaca gctggttgat atggctgctc
1201agattgctga tggtatggca tatattgaaa gaatgaacta tattcaccga gatcttcggg
1261ctgctaatat tcttgtagga gaaaatcttg tgtgcaaaat agcagacttt ggtttagcaa
1321ggttaattga agacaatgaa tacacagcaa gacaaggtgc aaaatttcca atcaaatgga
1381cagctcctga agctgcactg tatggtcggt ttacaataaa gtctgatgtc tggtcatttg
1441gaattctgca aacagaacta gtaacaaagg gccgagtgcc atatccaggt atggtgaacc
1501gtgaagtact agaacaagtg gagcgaggat acaggatgcc gtgccctcag ggctgtccag
1561aatccctcca tgaattgatg aatctgtgtt ggaagaagga ccctgatgaa agaccaacat
1621ttgAATATAT TCAGTCCTTC TTGGAAGACT ACTTCACTGC TACAGAGCCA CAGTACCAGC
1681CAGGAGAAAA TTTATACCCA ACTTTCTTGT ACaaagtggt tggtaagcct atccctaacc
1741ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1801cgacaatcaa cctctggatt a

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