Construct: ORF ccsbBroad304_01800

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002701.1_s304c1, BRDN0000400821
Derived from:
ccsbBroadEn_01800
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZSCAN21 (7589)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01800
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7589 ZSCAN21 zinc finger and SCAN domain... NM_001362779.1 100% 100%
2 human 7589 ZSCAN21 zinc finger and SCAN domain... NM_001362780.1 100% 100%
3 human 7589 ZSCAN21 zinc finger and SCAN domain... NM_145914.3 100% 100%
4 human 7589 ZSCAN21 zinc finger and SCAN domain... XM_005250568.4 100% 100%
5 human 7589 ZSCAN21 zinc finger and SCAN domain... XM_006716113.3 100% 100%
6 human 7589 ZSCAN21 zinc finger and SCAN domain... NM_001362781.2 90.5% 55.2% 782_783ins103;1317_1350del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1485
ORF length:
1419
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat gaccaaggta ctaggcatgg ccccagttct gggccctagg cctccacagg
121agcaggtggg gcctctgatg gtaaaagtcg aggagaaaga agagaaaggc aagtaccttc
181ctagcctgga gatgttccgc cagcgcttca ggcagtttgg gtaccatgat acccctggac
241cccgagaggc cctgagccaa ctccgggtgc tctgctgtga gtggctgagg cccgagatcc
301acaccaagga gcagatcctg gagctactgg tgctggagca gttcctgacc atcctgcccc
361aggagctcca ggcctgggtg caggagcatt gcccggagag cgctgaagag gctgtcactc
421tcctcgaaga tctggagcgg gaactggatg agccaggaca ccaggtctca actcctccaa
481acgaacagaa accggtgtgg gagaagatat cctcctcagg aactgcaaag gaatccccga
541gcagcatgca gccacagccc ttggagacca gtcacaaata cgagtcttgg gggcccctgt
601acatccaaga gtctggtgag gagcaggagt tcgctcaaga tccaagaaag gtccgagatt
661gcagattgag tacccagcac gaggaatcag cagatgagca gaaaggttct gaagcagagg
721ggctcaaagg ggatataatt tctgtgatta tcgccaataa acctgaggcc agcttagaga
781ggcagtgcgt aaaccttgaa aatgaaaaag gaacaaaacc ccctcttcaa gaggcaggct
841ccaagaaagg tagagaatca gttcctacta aacctacccc aggagagaga cgttatatat
901gtgctgaatg tggcaaagcc tttagtaata gctcaaatct caccaaacac aggagaacac
961acactgggga gaaaccttac gtgtgcacca agtgtgggaa agctttcagc cacagctcaa
1021acctcaccct ccactacaga acacacttgg tggaccggcc ctatgactgt aagtgtggaa
1081aagcttttgg gcagagctca gaccttctta aacatcagag aatgcacaca gaagaggcgc
1141catatcagtg caaagattgt ggcaaggctt tcagcgggaa aggcagcctc attcgtcact
1201atcggatcca cactggggag aagccttatc agtgtaacga atgtgggaag agcttcagtc
1261agcatgcggg cctcagctcc caccagagac tccacaccgg agagaagcca tataagtgta
1321aggagtgtgg gaaagccttc aaccacagct ccaacttcaa taaacaccac agaatccaca
1381ccggggaaaa gccctactgg tgtcatcact gtggaaagac cttctgtagc aagtccaatc
1441tttccaaaca tcagcgagtc cacactggag agggagaagc accgtaccca actttcttgt
1501acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1561gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

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