Construct: ORF ccsbBroad304_02114

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009692.1_s304c1, BRDN0000401940
Derived from:
ccsbBroadEn_02114
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DLGAP2 (9228)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02114
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9228 DLGAP2 DLG associated protein 2 NM_001346810.2 92.4% 92.4% 1_240del
2 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_011242055.2 82.3% 88.8% (many diffs)
3 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_006508782.3 77% 83.1% (many diffs)
4 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_006508781.3 76.4% 82.5% (many diffs)
5 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_017312785.1 76.4% 82.5% (many diffs)
6 mouse 244310 Dlgap2 discs, large (Drosophila) h... NM_172910.3 76.1% 82.2% (many diffs)
7 mouse 244310 Dlgap2 discs, large (Drosophila) h... NM_001145965.1 76.1% 82.1% (many diffs)
8 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_017312786.1 74.9% 81% (many diffs)
9 mouse 244310 Dlgap2 discs, large (Drosophila) h... XM_006508783.3 74.9% 80.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2994
ORF length:
2925
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaagggcctt tccggaagtc ggacccagcc gccgctgtgt tccgggcaca
121cgtgtggtct ggcgcccccg gaggactgcg agcacctgca ccacgggccc gacgcgcggc
181cgccctacct gctgagcccc gccgacagct gccccggggg gcgccaccgc tgctcgccgc
241gcagctcggt gcactcggag tgcgtgatga tgccggtggt gctgggcgac cacgtgtcca
301gcagcacctt cccgcggatg cactacagct cgcactacga cacgcgcgac gactgcgctg
361tggcccacgc gggcgccaag atcaaccgca tcccggccaa cctgctggac cagttcgaga
421agcagctgcc gctgcaccgg gacggcttcc acacgctgca gtaccagagg acgtccgcgg
481ccgccgagca gcgcagcgag agccccgggc ggatccgcca cctggtacac tccgtgcaga
541agctcttcac caagtcgcac tcgctggagg gctcctccaa aagcaacgcc aacggcacca
601aggcggacgg ccgggcggac gaccaccacc acgcccacca cgccaagcac agcaagagga
661gcaagagcaa ggagcgcaag ccggagggca agccccggcc cggcatgagc agctggtgga
721gctcggacga caacctggac agcgacagca cctatcggac gcccagcgtg ctcaaccggc
781accacctggg ccccgtggcc cactgctacc ccgacgcgct gcagagcccc ttcggggacc
841tgtccctcaa gacctccaag agcaacaacg acgtcaagtg ctcggcctgt gaggggttgg
901cgctgacgcc cgacgccaag tacctgaagc gcagctcctg gtctacgctg acggtcagcc
961aggccaagga ggcctaccgc aagagctcgc tgaacctgga caagccgctg ctgcaccagg
1021acgccaagcc cgccctgagg ccgtgccact acctccaggt acctcaggat gagtggggag
1081ggtaccccac cggtggcaaa gatgaggaga ttccctgcag gagaatgaga agtgggagtt
1141acattaaagc catgggggac gaggagagcg gagagtcaga ctccagcccc aagacatcac
1201caaagtcggc aatcctacca gagccgctgc tgaagtccat cggacagaga ccgcttggag
1261agcaccagac ccagacctac ctgcaagctg caagcgatgt gcctgtggga cacagcctgg
1321accccgctgc gaactacaac tccccgaaat tccgctcccg gaaccagagc tacatgaggg
1381ccgtcagcac cctgagccag gccagctgcg tgagccaggt gagcgaggcg gagatcaatg
1441ggcaattcga gtccgtgtgc gagtccgtct tcagtgaagt tgaatctcag gccatggatg
1501ccctcgacct cccgggatgt ttccgaacaa ggagtcacag ctaccttcga gccattcaag
1561ccggctactc ccaagatgac gaatgtattc ccatgatgac accctctgac atcacctcca
1621ccatcaggtc aacagcagct gtctcatata caaattacaa gaaaacgccc ccaccggtgc
1681cccctcggac cacctccaag cctctgatct cggtgacggc gcagagcagc accgaatcca
1741cccaggacgc ctaccaggac agccgcgcac agaggatgtc cccgtggccc caggacagcc
1801gcggcctcta caactccacg gacagcctgg acagcaacaa ggccatgaac ctcgcgctgg
1861aaacggccgc tgcccagcgc cacctgccag agagccagag cagctctgtg cggaccagcg
1921acaaggccat cctggtgtcc aaggcggagg agctcctcaa gagccgctgc tcctccatcg
1981ggattcagga ttctgaattc ccagagcatc agccataccc aaggtcagat gtggaaacgg
2041ccacagattc tgacacggag agccgcggtc tgcgggaata ccactctgtc ggggtgcaag
2101tggaagatga gaagcgacac ggacgtttta aacgttctaa cagcgtcacg gccgccgtcc
2161aagctgacct ggagctggag gggttcccag gccacatcac cacggaggac aaaggccttc
2221agttcggctc atccttccag cggcactccg agcccagcac ccccacccag tacagcgcgg
2281tgagaactgt acggacccag gggctcttca gctatagaga agactatcgg acccaagtgg
2341acacctccac cctgccccct ccagacccct ggctggagcc cgccatcgac acggtagaga
2401ctgggaggat gtctccgtgc cgcagggatg gctcgtggtt tttgaagctg ctgcacgcag
2461agacaaagag gatggaaggc tggtgcaaag agatggagag agaggcggag gagaacgacc
2521tctcggagga aattctcggt aaaatcagga gtgctgttgg gagtgcccag cttctcatgt
2581cccagaaatt ccagcagttt tattggcttt gccaacagaa tatggacccc agcgccatgc
2641cgaggccgac gtcgcaggac ctggccggct actgggacat gctgcagctc tccattgagg
2701acgtcagcat gaagttcgac gagctgcagc ggctgcggct caacgactgg aagatgatgg
2761agtccccgga aagaaaggaa gaaagaaagg tcccgcctcc aataccaaag aagcctccca
2821aggggaagtt tcccatcaca agagaaaaat ccctggacct gcccgacaga caacgccagg
2881aagcccggag gcgcctcatg gccgccaagc gagcggcgtc cttccggcag aattccgcct
2941ccgagcgcgc ggacagcatc gagatctaca tccccgaggc ccagacccgg ctcttgccaa
3001ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
3061cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

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