Construct: ORF ccsbBroad304_02124

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010095.1_s304c1, BRDN0000406308
Derived from:
ccsbBroadEn_02124
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AIMP1 (9255)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02124
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9255 AIMP1 aminoacyl tRNA synthetase c... NM_001142415.1 100% 100%
2 human 9255 AIMP1 aminoacyl tRNA synthetase c... NM_001142416.2 100% 100%
3 human 9255 AIMP1 aminoacyl tRNA synthetase c... NM_004757.3 100% 100%
4 human 9255 AIMP1 aminoacyl tRNA synthetase c... XM_017008835.2 100% 100%
5 human 9255 AIMP1 aminoacyl tRNA synthetase c... XM_017008836.2 100% 100%
6 mouse 13722 Aimp1 aminoacyl tRNA synthetase c... NM_007926.2 81.4% 83.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1002
ORF length:
936
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc aaataatgat gctgttctga agagactgga gcagaagggt gcagaggcag
121atcaaatcat tgaatatctt aagcagcaag tttctctact taaggagaaa gcaattttgc
181aggcaacttt gagggaagag aagaaacttc gagttgaaaa tgctaaactg aagaaagaaa
241ttgaagaact gaaacaagag ctaattcagg cagaaattca aaatggagtg aagcaaatac
301catttccatc tggtactcca ctgcacgcta attctatggt ttctgaaaat gtgatacagt
361ctacagcagt aacaaccgta tcttctggta ccaaagaaca gataaaagga ggaacaggag
421acgaaaagaa agcgaaagag aaaattgaaa agaaaggaga gaagaaggag aaaaaacagc
481aatcaatagc tggaagtgcc gactctaagc caatagatgt ttcccgtctg gatcttcgaa
541ttggttgcat cataactgct agaaaacacc ctgatgcaga ttctttgtat gtggaagaag
601tagatgtcgg agaaatagcc ccaaggacag ttgtcagtgg cctggtgaat catgttcctc
661ttgaacagat gcaaaatcgg atggtgattt tactttgtaa cctgaaacct gcaaagatga
721ggggagtatt atctcaagca atggtcatgt gtgctagttc accagagaaa attgaaatct
781tggctcctcc aaatgggtct gttcctggag acagaattac ttttgatgct ttcccaggag
841agcctgacaa ggagctgaat cctaagaaga agatttggga gcagatccag cctgatcttc
901acactaatga tgagtgtgtg gctacataca aaggagttcc ctttgaggtg aaagggaagg
961gagtatgtag ggctcaaacc atgagcaaca gtggaatcaa atacccaact ttcttgtaca
1021aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1081ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)