Construct: ORF ccsbBroad304_02148

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000065.1_s304c1, BRDN0000400296
Derived from:
ccsbBroadEn_02148
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC22A6 (9356)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02148
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9356 SLC22A6 solute carrier family 22 me... NM_153276.3 100% 100%
2 human 9356 SLC22A6 solute carrier family 22 me... XM_017018562.2 99.8% 99.8% 920_922delAGC
3 human 9356 SLC22A6 solute carrier family 22 me... NM_004790.5 97.6% 97.6% 1563_1601del
4 human 9356 SLC22A6 solute carrier family 22 me... NM_153277.3 92% 92% 1360_1361ins132
5 human 9356 SLC22A6 solute carrier family 22 me... NM_153278.3 89.8% 89.8% 1360_1361ins132;1431_1469del
6 mouse 18399 Slc22a6 solute carrier family 22 (o... NM_008766.3 84.3% 85.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1716
ORF length:
1650
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ctttaatgac ctcctgcagc aggtgggggg tgtcggccgc ttccagcaga
121tccaggtcac cctggtggtc ctccccctgc tcctgatggc ttctcacaac accctgcaga
181acttcactgc tgccatccct acccaccact gccgcccgcc tgccgatgcc aacctcagca
241agaacggggg gctggaggtc tggctgcccc gggacaggca ggggcagcct gagtcctgcc
301tccgcttcac ctccccgcag tggggactgc cctttctcaa tggcacagaa gccaatggca
361caggggccac agagccctgc accgatggct ggatctatga caacagcacc ttcccatcta
421ccatcgtgac tgagtgggac cttgtgtgct ctcacagggc cctacgccag ctggcccagt
481ccttgtacat ggtgggggtg ctgctcggag ccatggtgtt cggctacctt gcagacaggc
541taggccgccg gaaggtactc atcttgaact acctgcagac agctgtgtca gggacctgcg
601cagccttcgc acccaacttc cccatctact gcgccttccg gctcctctcg ggcatggctc
661tggctggcat ctccctcaac tgcatgacac tgaatgtgga gtggatgccc attcacacac
721gggcctgcgt gggcaccttg attggctatg tctacagcct gggccagttc ctcctggctg
781gtgtggccta cgctgtgccc cactggcgcc acctgcagct actggtctct gcgccttttt
841ttgccttctt catctactcc tggttcttca ttgagtcggc ccgctggcac tcctcctccg
901ggaggctgga cctcaccctg agggccctgc agagagtcgc ccggatcaat gggaagcggg
961aagaaggagc caaattgagt atggaggtac tccgggccag tctgcagaag gagctgacca
1021tgggcaaagg ccaggcatcg gccatggagc tgctgcgctg ccccaccctc cgccacctct
1081tcctctgcct ctccatgctg tggtttgcca ctagctttgc atactatggg ctggtcatgg
1141acctgcaggg ctttggagtc agcatctacc taatccaggt gatctttggt gctgtggacc
1201tgcctgccaa gcttgtgggc ttccttgtca tcaactccct gggtcgccgg cctgcccaga
1261tggctgcact gctgctggca ggcatctgca tcctgctcaa tggggtgata ccccaggacc
1321agtccattgt ccgaacctct cttgctgtgc tggggaaggg ttgtctggct gcctccttca
1381actgcatctt cctgtatact ggggaactgt atcccacaat gatccggcag acaggcatgg
1441gaatgggcag caccatggcc cgagtgggca gcatcgtgag cccactggtg agcatgactg
1501ccgagctcta cccctccatg cctctcttca tctacggtgc tgttcctgtg gccgccagcg
1561ctgtcactgt cctcctgcca gagaccctgg gccagccact gccagacacg gtgcaggacc
1621tggagagcag gaaagggaaa cagacgcgac agcaacaaga gcaccagaag tatatggtcc
1681cactgcaggc ctcagcacaa gagaagaatg gactctgccc aactttcttg tacaaagtgg
1741ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1801ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)