Construct: ORF ccsbBroad304_02554

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009521.1_s304c1, BRDN0000407174
Derived from:
ccsbBroadEn_02554
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TRAFD1 (10906)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02554
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10906 TRAFD1 TRAF-type zinc finger domai... NM_001143906.1 100% 100%
2 human 10906 TRAFD1 TRAF-type zinc finger domai... NM_006700.3 100% 100%
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1812
ORF length:
1746
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc tgaatttcta gatgaccagg aaactcgact gtgtgacaac tgcaaaaaag
121aaattcctgt gtttaacttt accatccatg agatccactg tcaaaggaac attggtatgt
181gtcctacctg taaggaacca tttcccaaat ctgacatgga gactcacatg gctgcagaac
241actgtcaggt gacctgcaaa tgtaacaaga agttggagaa gaggctgtta aagaagcatg
301aggagactga gtgccctttg cggcttgctg tctgccagca ctgtgattta gaactttcca
361ttctcaaact gaaggaacat gaagattatt gtggtgcccg gacggaacta tgtggcaact
421gtggtcgcaa tgtccttgtg aaagatctga agactcaccc tgaagtttgt gggagagagg
481gggaggaaaa gagaaatgag gttgccatac ctcctaatgc atatgatgaa tcttggggtc
541aggatggaat ctggattgca tcccaactcc tcagacaaat tgaggctctg gacccaccca
601tgaggctgcc gcgaaggccc ctgagagcct ttgaatcaga tgttttccac aatagaacta
661ccaaccaaag gaacattaca gcccaggttt caattcagaa taatctgttt gaagaacaag
721agaggcagga aaggaataga ggccaacagc cccccaaaga gggtggtgaa gagagtgcaa
781acttggactt catgttggcc ctaagtctgc aaaatgaagg ccaagcctcc agtgtggcag
841agcaggactt ctggagggcc gtatgtgagg ccgaccagtc tcatggcggt cccaggtctc
901tcagtgacat aaagggtgca gctgacgaga tcatgttgcc ttgtgaattt tgtgaggagc
961tctacccaga ggaactgctg attgaccatc agacaagctg taacccttca cgtgccttac
1021cttcactcaa tactggcagc tcttccccca gaggggtgga ggaacctgat gtcatcttcc
1081agaacttctt gcaacaggct gcaagtaacc agttagactc tttgatgggc ctgagcaatt
1141cacaccctgt ggaggagagc atcattatcc catgtgaatt ctgtggggta cagctggaag
1201aggaggtgct gttccatcac caggaccagt gtgaccaacg cccagccact gcaaccaacc
1261atgtgacaga ggggattcct agactggatt cccagcctca agagacctca ccagagctgc
1321ccaggaggcg tgtcagacac cagggagacc tgtcttctgg ttacctggat gatactaagc
1381aggaaacagc taatgggccc acctcctgtc tgcctcccag ccgacccatt aacaatatga
1441cagctaccta taaccagcta tcgagatcaa catcaggccc cagacctggg tgccagccca
1501gctctccttg tgtgccgaag ctcagcaact cagacagcca ggacatccag gggcggaatc
1561gagacagcca gaatggggcc atagcccctg ggcacgtttc agtgattcgc cctcctcaaa
1621atctctaccc agaaaacatt gtgccctctt tctcccctgg gccttcaggg agatacggag
1681ctagtggtag gagtgaaggt ggcaggaatt cccgggtcac ccctgcagct gccaactacc
1741gcagcagaac tgcaaaggca aagccttcca agcaacaggg agctggggat gcagaagagg
1801aagaggagga gtacccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1861tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1921caatcaacct ctggatta

Download FASTA (ORF) (Full)

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