Construct: ORF ccsbBroad304_02560

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015025.1_s304c1, BRDN0000410022
Derived from:
ccsbBroadEn_02560
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNPS1 (10921)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02560
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10921 RNPS1 RNA binding protein with se... NM_001286625.1 100% 100%
2 human 10921 RNPS1 RNA binding protein with se... NM_006711.4 100% 100%
3 human 10921 RNPS1 RNA binding protein with se... NM_080594.4 100% 100%
4 human 10921 RNPS1 RNA binding protein with se... XM_005255048.2 100% 100%
5 human 10921 RNPS1 RNA binding protein with se... XM_005255049.4 100% 100%
6 human 10921 RNPS1 RNA binding protein with se... NM_001286626.2 92.3% 92.1% 0_1ins69;2T>G
7 human 10921 RNPS1 RNA binding protein with se... NM_001286627.2 71.5% 65.5% (many diffs)
8 human 10921 RNPS1 RNA binding protein with se... NR_104485.2 45.4% (many diffs)
9 mouse 19826 Rnps1 ribonucleic acid binding pr... NM_001080127.1 89.2% 100% (many diffs)
10 mouse 19826 Rnps1 ribonucleic acid binding pr... NM_009070.2 89.2% 100% (many diffs)
11 mouse 19826 Rnps1 ribonucleic acid binding pr... XM_017317362.1 89.2% 100% (many diffs)
12 mouse 19826 Rnps1 ribonucleic acid binding pr... NM_001080128.1 81.7% 92.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
981
ORF length:
915
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga tttatcagga gtgaaaaaga agagcttgct aggagtcaaa gaaaataata
121aaaagtccag cactagggct ccttcaccta ccaaacgcaa agaccgctca gatgagaagt
181ccaaggatcg ctcaaaagat aaaggggcca ccaaggagtc gagtgagaag gatcgcggcc
241gggacaaaac ccgaaagagg cgcagcgctt ccagtggtag cagcagtacc aggtctcggt
301ccagctcgac ttccagctca ggctccagca ccagcactgg ctcaagcagt ggctccagct
361cttcctcagc atccagccgc tcaggaagct ccagcacctc ccgcagctcc agctctagca
421gctcttctgg ctctccaagt ccttctcggc gcagacacga caacaggagg cgctcccgct
481ccaaatccaa accacctaaa agagatgaaa aggagaggaa aaggcggagc ccatctccta
541agcccaccaa agtgcacatt gggagactca cccggaatgt gacaaaggat cacatcatgg
601agatattttc cacctatggg aaaattaaaa tgattgacat gcccgtggaa aggatgcatc
661cccatctgtc caaaggctat gcgtacgtag agtttgagaa tccagatgaa gccgagaagg
721cgctgaagca catggatgga ggacaaattg atggccagga gatcactgcc accgccgtgc
781tggccccctg gcctaggcca ccccccagga gattcagccc tcccaggaga atgttgccac
841caccgcctat gtggcgcagg tctcccccac ggatgaggag aaggtcccgc tccccgaggc
901gcaggtcccc cgtgcgccgg agatcacggt ccccgggccg ccgccgccac aggagccgct
961ccagctccaa ctcctcccga tacccaactt tcttgtacaa agtggttggt aagcctatcc
1021ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1081ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)