Construct: ORF ccsbBroad304_02808

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002748.1_s304c1, BRDN0000403244
Derived from:
ccsbBroadEn_02808
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CORO1C (23603)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02808
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23603 CORO1C coronin 1C NM_001276471.1 100% 100%
2 human 23603 CORO1C coronin 1C NM_014325.3 100% 100%
3 human 23603 CORO1C coronin 1C XM_017019122.2 100% 100%
4 human 23603 CORO1C coronin 1C XM_017019123.2 100% 100%
5 human 23603 CORO1C coronin 1C XM_024448914.1 100% 100%
6 human 23603 CORO1C coronin 1C XM_024448915.1 100% 100%
7 human 23603 CORO1C coronin 1C XM_024448916.1 100% 100%
8 human 23603 CORO1C coronin 1C NM_001105237.2 89.9% 89.9% 1_159del
9 human 23603 CORO1C coronin 1C XM_017019121.2 89.9% 89.9% 1_159del
10 human 23603 CORO1C coronin 1C XM_011538125.1 58.3% 56.5% (many diffs)
11 human 23603 CORO1C coronin 1C XM_024448917.1 57.1% 55.4% (many diffs)
12 human 23603 CORO1C coronin 1C XR_944514.2 37% 1_95del;949_971del;1541_3837del
13 human 23603 CORO1C coronin 1C XR_001748650.1 35.9% 1_95del;949_1092del;1662_3958del
14 human 23603 CORO1C coronin 1C XR_002957304.1 35.2% 1_289del;1143_1165del;1735_4031del
15 mouse 23790 Coro1c coronin, actin binding prot... NM_011779.3 88.5% 97.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1488
ORF length:
1422
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag gcgagtggta cgacagagca agtttcggca tgtatttggg caagcggtga
121aaaatgacca gtgctatgat gacatccggg tttctcgtgt gacctgggat agttcctttt
181gtgctgtcaa tcccagattt gttgccataa tcatagaggc aagtggggga ggagcgttcc
241ttgtcctccc tctgcacaag actggtcgaa ttgacaaatc ttaccctaca gtatgtggcc
301acacaggacc agtgctggac atagactggt gcccacataa cgatcaggtc attgccagcg
361gttcagagga ctgcacggtc atggtatggc agatcccaga aaatggactc accctttccc
421tgactgaacc tgtggtgatt ttggaaggcc actcaaagag agtcggcatc gtggcttggc
481atccaacggc ccgcaatgtg cttcttagtg caggctgtga taatgccatt atcatctgga
541atgtgggaac aggggaagcc cttataaact tggacgatat gcattcagac atgatttaca
601atgtgagctg gaaccggaat ggcagtctga tctgcacagc ttccaaagac aagaaagtga
661gagtcattga tcccaggaaa caagagattg ttgctgagaa ggagaaagca catgaaggag
721caagacccat gagagccatc ttcctggccg atggcaatgt cttcaccact gggttcagcc
781gcatgagcga gcggcagctg gctctctgga atccgaaaaa tatgcaggaa ccaattgctc
841ttcatgagat ggacactagc aatggggtgt tgctgccttt ctatgaccct gacaccagca
901tcatttactt atgtggaaag ggtgacagca gtattcgcta ttttgagatc acggatgaat
961ccccgtacgt ccactacctc aacacattca gcagcaagga gcctcagaga gggatgggtt
1021acatgcccaa gaggggactt gatgttaaca aatgtgagat tgccagattc ttcaaacttc
1081atgagagaaa gtgtgaacct attattatga ctgttcccag gaagtctgac cttttccaag
1141atgacctgta tcctgacaca gcggggccag aggccgcgct ggaggcagaa gagtggttcg
1201aaggcaagaa tgcagaccca atcctcatct ccttgaagca cgggtacatt ccaggcaaaa
1261acagggatct caaggtggtc aagaagaaca ttctggatag caagcccact gcaaacaaga
1321agtgcgacct gatcagcatc cccaagaaaa ccacagacac ggccagtgtg caaaatgaag
1381ccaagttgga tgagatttta aaagagatca aatctataaa agacacaatc tgcaatcaag
1441atgagcgtat ttccaagtta gaacagcaga tggcaaagat agcagcctgc ccaactttct
1501tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1561aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

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