Construct: ORF ccsbBroad304_03180

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008702.1_s304c1, BRDN0000460483
Derived from:
ccsbBroadEn_03180
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DESI2 (51029)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03180
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51029 DESI2 desumoylating isopeptidase 2 NM_016076.5 100% 100%
2 human 51029 DESI2 desumoylating isopeptidase 2 XM_011544205.3 94.8% 94.3% (many diffs)
3 human 51029 DESI2 desumoylating isopeptidase 2 XM_011544203.3 89.8% 87.6% (many diffs)
4 human 51029 DESI2 desumoylating isopeptidase 2 NM_001297746.2 82.9% 82.9% 113_114ins99
5 human 51029 DESI2 desumoylating isopeptidase 2 XM_011544207.2 77.9% 77.3% (many diffs)
6 human 51029 DESI2 desumoylating isopeptidase 2 XM_011544206.3 74.2% 72% (many diffs)
7 human 51029 DESI2 desumoylating isopeptidase 2 XR_001737208.2 49.4% (many diffs)
8 human 51029 DESI2 desumoylating isopeptidase 2 NR_123735.2 14.3% 1_188del;397_398insAGAAG;766_4012del
9 human 51029 DESI2 desumoylating isopeptidase 2 NR_123736.2 12.1% 1_188del;303_304ins94;677_3923del
10 mouse 78825 Desi2 desumoylating isopeptidase 2 NM_024282.3 90.7% 96.9% (many diffs)
11 mouse 78825 Desi2 desumoylating isopeptidase 2 XM_006497038.3 82.8% 88.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
648
ORF length:
582
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ggctaaccag ttagtggtgc tcaacgtgta cgacatgtat tggatgaacg
121aatatacctc atccattgga attggagttt ttcattcagg aattgaagtc tatggcagag
181aatttgctta tggtggccat ccttacccct tttctggaat atttgaaatt tccccaggaa
241atgcttctga actaggagaa acatttaaat ttaaagaagc tgttgtttta gggagcacgg
301acttcctaga agatgatata gaaaaaattg tagaagaact gggaaaagaa tacaaaggca
361atgcttatca tttaatgcat aaaaactgca atcatttttc ttcagcttta tcagagattc
421tttgtgggaa agagattcct cgctggatca atcgacttgc ctacttcagc tcctgtatac
481cctttctaca gagttgcctc ccgaaggagt ggctcacgcc cgcagccctg cagtctagtg
541tcagccaaga actccaggat gaactggagg aagcagagga tgctgccgca tccgcttccg
601tggcaagcac tgcagcaggc tccagacccg ggcgccacac taaactatac ccaactttct
661tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
721aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)