Construct: ORF ccsbBroad304_03277

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012292.1_s304c1, BRDN0000461223
Derived from:
ccsbBroadEn_03277
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNK9 (51305)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03277
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51305 KCNK9 potassium two pore domain c... NM_001282534.2 100% 100%
2 human 51305 KCNK9 potassium two pore domain c... XM_011517102.2 100% 100%
3 human 51305 KCNK9 potassium two pore domain c... XM_011517101.2 77.1% 75.1% (many diffs)
4 human 51305 KCNK9 potassium two pore domain c... XM_017013530.1 70.5% 70.5% 0_1ins330
5 human 51305 KCNK9 potassium two pore domain c... XM_017013531.1 70.5% 70.5% 0_1ins330
6 human 51305 KCNK9 potassium two pore domain c... XM_011517103.2 51.6% 48.4% (many diffs)
7 human 51305 KCNK9 potassium two pore domain c... NR_104210.2 33.4% 1_131del;1254_3358del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1191
ORF length:
1122
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaagaggcag aacgtgcgga ctctgtccct catcgtctgc accttcacct
121acctgctggt gggcgccgcc gtgttcgacg ccctcgagtc ggaccacgag atgcgcgagg
181aggagaaact caaagccgag gagatccgga tcaaggggaa gtacaacatc agcagcgagg
241actaccggca gctggagctg gtgatcctgc agtcggaacc gcaccgcgcc ggcgtccagt
301ggaaattcgc cggctccttc tactttgcga tcacggtcat caccaccata ggttatgggc
361acgctgcacc tggcaccgat gcgggcaagg ccttctgcat gttctacgcc gtgctgggca
421tcccgctgac actggtcatg ttccagagcc tgggcgagcg catgaacacc ttcgtgcgct
481acctgctgaa gcgcattaag aagtgctgtg gcatgcgcaa cactgacgtg tctatggaga
541acatggtgac tgtgggcttc ttctcctgca tggggacgct gtgcatcggg gcggccgcct
601tctcccagtg tgaggagtgg agcttcttcc acgcctacta ctactgcttc atcacgttga
661ctaccattgg gttcggggac tacgtggccc tgcagaccaa gggtgccctg cagaagaagc
721cgctctacgt ggcctttagc tttatgtata tcctggtggg gctgacggtc atcggggcct
781tcctcaacct ggtcgtcctc aggttcttga ccatgaacag tgaggatgag cggcgggatg
841ctgaagagag ggcatccctc gccggaaacc gcaacagcat ggtcattcac atccctgagg
901agccgcggcc cagccggccc aggtacaagg cggacgtccc ggacctgcag tctgtgtgct
961cctgcacctg ctaccgctcg caggactatg gcggccgctc ggtggcaccg cagaactcct
1021tcagcgccaa gcttgccccc cactacttcc actccatctc ttacaagatc gaggagatct
1081caccaagcac attaaaaaac agcctcttcc catcgcctat tagctccatc tctcctgggt
1141tacacagctt taccgaccac cagaggctga tgaaacgccg gaagtccgtt ttgccaactt
1201tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1261agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)