Construct: ORF ccsbBroad304_03456

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017531.1_s304c1, BRDN0000408195
Derived from:
ccsbBroadEn_03456
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ROPN1 (54763)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03456
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54763 ROPN1 rhophilin associated tail p... NM_001317774.1 100% 100%
2 human 54763 ROPN1 rhophilin associated tail p... NM_017578.4 100% 100%
3 human 54763 ROPN1 rhophilin associated tail p... XM_011512933.2 100% 100%
4 human 54763 ROPN1 rhophilin associated tail p... XM_011512934.2 100% 100%
5 human 152015 ROPN1B rhophilin associated tail p... NM_001012337.3 97.1% 95.7% (many diffs)
6 human 152015 ROPN1B rhophilin associated tail p... NM_001308313.2 97.1% 95.7% (many diffs)
7 human 152015 ROPN1B rhophilin associated tail p... XM_006713513.3 97.1% 95.7% (many diffs)
8 human 54763 ROPN1 rhophilin associated tail p... NM_001317775.1 56.6% 56.6% 0_1ins276
9 human 152015 ROPN1B rhophilin associated tail p... XM_005247138.3 54.7% 53.7% (many diffs)
10 mouse 76378 Ropn1 ropporin, rhophilin associa... NM_030744.2 85.5% 83.4% (many diffs)
11 mouse 76378 Ropn1 ropporin, rhophilin associa... XM_006522698.3 85.5% 83.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
705
ORF length:
636
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctcagaca gataagccaa catgcatccc gccggagctg ccgaagatgc
121tgaaggagtt tgccaaagcc gccattaggg tgcagccgca ggacctcatc cagtgggcag
181ccgattattt tgaggccctg tcccgtggag agacgcctcc ggtgagagag cggtctgagc
241gagtcgcttt gtgtaaccgg gcagagctaa cacctgagct gttaaagatc ctgcattctc
301aggttgctgg cagactgatc atccgtgcag aggagctggc ccagatgtgg aaagtggtga
361atctcccaac agatctgttt aatagtgtga tgaatgtggg tcgcttcacg gaggagatcg
421agtggctgaa gtttttagcc cttgcttgca gcgctctggg agttactatt accaaaactc
481tcaagatagt gtgtgaggtc ttatcatgtg accataatgg tgggtcgccc cggatcccgt
541tcagcacctt ccagtttctc tacacgtata ttgccaaagt ggatggggag atctctgcat
601cacatgtcag caggatgcta aactacatgg aacaggaagt aattggccct gatggtataa
661tcacagtgaa tgactttacc caaaacccca gggttcagct ggagttgcca actttcttgt
721acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
781gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)