Construct: ORF ccsbBroad304_03530

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012000.1_s304c1, BRDN0000410415
Derived from:
ccsbBroadEn_03530
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM28 (55131)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03530
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55131 RBM28 RNA binding motif protein 28 NM_018077.3 100% 100%
2 human 55131 RBM28 RNA binding motif protein 28 XM_011516370.3 95.7% 95.7% 117_218del
3 human 55131 RBM28 RNA binding motif protein 28 XM_017012390.1 90.1% 90.1% 1562_1563ins225
4 human 55131 RBM28 RNA binding motif protein 28 XM_017012389.1 86.2% 86.2% 117_218del;1664_1665ins225
5 human 55131 RBM28 RNA binding motif protein 28 NM_001166135.2 81.4% 81.4% 113_114ins423
6 human 55131 RBM28 RNA binding motif protein 28 XR_001744830.1 24.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2343
ORF length:
2277
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cggcctgacc ttatttgtgg gccgcctccc gccctcggcc cgcagtgagc
121agctggagga actgttcagt caggtggggc cggtgaagca gtgcttcgtg gtgactgaaa
181aagggagtaa ggcatgtcga ggctttggct atgtcacttt ttcaatgctg gaagatgttc
241agagggccct caaggagatt accacctttg aaggttgcaa gatcaacgtg actgttgcca
301agaaaaaact gaggaacaag acaaaggaaa aggggaaaaa tgaaaactca gagtgcccaa
361agaaggagcc gaaggctaaa aaagccaaag tggcagataa gaaagccaga ttaattattc
421ggaacctgag ctttaagtgt tcagaagatg acttgaagac agtatttgct caatttggag
481ctgtcctgga agtaaatatc cctaggaaac cagatgggaa gatgcgcggt tttggttttg
541ttcagttcaa aaacctccta gaagcaggta aagctctcaa aggcatgaac atgaaagaga
601taaaaggccg gacagtggct gtggattggg ccgtggcaaa ggataaatat aaagatacac
661agtctgtttc tgctataggt gaggaaaaga gccatgaatc taaacatcag gaatcagtta
721aaaagaaggg cagagaggaa gaggatatgg aagaggaaga aaacgatgat gatgacgatg
781atgatgatga agaagatggg gtttttgatg atgaagatga agaggaagag aatatagaat
841caaaggtgac caagcctgtg caaattcaga agagagcagt caagagacca gcccctgcaa
901aaagcagtga tcattctgag gaggacagtg acctagagga aagcgatagt attgatgatg
961gagaggaact ggctcagagt gataccagca ctgaggagca agaggataaa gctgtgcaag
1021tctcaaacaa aaagaagagg aaattaccct ctgatgtgaa tgaagggaaa actgttttta
1081tcagaaatct gtcctttgac tcagaagaag aagaacttgg ggagcttctc caacagtttg
1141gagaactcaa atatgtccgc attgtcttgc atccagacac agagcattct aaaggttgtg
1201catttgccca gttcatgact caagaagcag ctcagaaatg ccttctagct gcttctccag
1261agaatgaggc tggtgggctt aaactggatg gccggcagct caaggttgac ttggcggtga
1321cccgtgatga ggctgcaaag cttcagacga cgaaggtgaa gaagccgact ggcacccgga
1381atctctatct ggcccgagaa ggcttgattc gtgctgggac gaaggctgca gagggtgtga
1441gtgctgctga tatggccaaa agagaacggt ttgagctgct gaagcatcag aaactcaagg
1501accagaatat ctttgtctcc cgaaccaggc tctgcctgca caatctccca aaggctgtag
1561atgacaaaca gctcagaaag ctgctgctga gtgctactag tggagagaaa ggggtgcgca
1621tcaaggagtg tagagtgatg cgagacctca aaggagttca tgggaacatg aagggtcagt
1681ccctgggcta cgcctttgcg gagttccaag agcacgagca tgccctgaaa gccctccgcc
1741tcatcaacaa caatccagaa atctttgggc ctctgaagag accaatagtg gagttctctt
1801tagaagatcg aagaaaactt aaaatgaagg aattaaggat ccagcgcagc ttgcaaaaaa
1861tgagatccaa gcctgcaact ggtgagcctc agaaggggca accagagcct gcaaaagacc
1921agcaacagaa ggcagctcaa caccacacag aggaacaaag caaggtgccc ccagagcaga
1981agagaaaggc gggctctacc tcatggaccg ggttccagac caaggctgaa gtggagcagg
2041tggagctgcc tgatggaaag aagagaagaa aggtcctggc gctcccctca caccgaggcc
2101ccaaaatcag gttgcgggac aaaggcaaag tgaagcccgt ccatcccaaa aagccaaagc
2161cacagataaa ccagtggaag caggagaagc agcaattatc gtccgagcag gtatctagga
2221aaaaagctaa gggaaataag acggaaaccc gcttcaacca gctggtcgaa caatataagc
2281agaaattatt gggaccttct aaaggagcac ctcttgcaaa gaggagcaaa tggtttgata
2341gttgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
2401tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
2461tctggatta

Download FASTA (ORF) (Full)