Construct: ORF ccsbBroad304_03540

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000194.1_s304c1, BRDN0000461594
Derived from:
ccsbBroadEn_03540
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MSL2 (55167)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03540
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55167 MSL2 MSL complex subunit 2 NM_018133.4 100% 100%
2 human 55167 MSL2 MSL complex subunit 2 NM_001145417.2 87.1% 87.1% 0_1ins222
3 human 55167 MSL2 MSL complex subunit 2 XM_005247571.3 87.1% 87.1% 0_1ins222
4 human 55167 MSL2 MSL complex subunit 2 XM_006713684.3 87.1% 87.1% 0_1ins222
5 human 55167 MSL2 MSL complex subunit 2 XM_011512949.2 87.1% 87.1% 0_1ins222
6 mouse 77853 Msl2 male-specific lethal 2 homo... NM_001100451.2 95.3% 98.9% (many diffs)
7 mouse 77853 Msl2 male-specific lethal 2 homo... XM_017313694.1 82.7% 86.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1800
ORF length:
1731
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaaccccgtg aatgctactg ctctctacat ttccgcgagc cgcctagtgc
121tcaactacga ccccggagac cccaaggcgt ttactgagat taacaggctc ttgccttact
181tccgacagtc cctttcgtgc tgtgtttgcg gacatttgct acaagatcct attgcaccca
241ccaactccac ctgccaacat tatgtctgca aaacttgtaa aggcaagaaa atgatgatga
301aaccttcctg tagctggtgc aaagactatg agcagtttga ggaaaacaag cagttaagca
361tcctagtgaa ctgctacaaa aaactatgcg agtatataac acagactaca ctggcacggg
421atataataga agcagttgac tgttcttctg atattttggc tttgcttaat gatggatcat
481tgttttgtga ggagacagaa aaaccctcag attcatcctt tactttgtgt ttgacacatt
541cccctttacc ttcaacctca gaacccacaa ctgatcctca agctagttta tctccaatgt
601ctgaaagcac cctcagcatt gctattggca gttctgttat caatggtttg cctacttata
661atgggctttc aatagataga tttggtataa atattccttc acctgaacat tcaaatacga
721ttgacgtatg taatactgtt gacataaaaa ctgaggatct gtctgacagc ctgccacccg
781tttgtgacac agtagccact gacttatgtt ccacaggcat tgatatctgc agtttcagtg
841aagatataaa acctggagac tctctgttac tgagtgttga ggaagtactc cgcagcttag
901aaactgtttc aaatacagag gtctgttgcc ctaatttgca gccgaacttg gaagccactg
961tatccaatgg accttttctg cagctttctt cccagtctct tagccataat gtttttatgt
1021ccaccagtcc tgcacttcat gggttatcat gtacagcagc aactccgaag atagcaaaat
1081tgaatagaaa acgatccaga tcagagagtg acagtgagaa agttcagcca cttccaattt
1141ctaccattat ccgaggccca acactggggg catctgctcc tgtgacagtg aaacgggaga
1201gcaaaatttc tcttcaacct atagcaactg ttcccaatgg aggcacaaca cctaaaatca
1261gcaaaactgt acttttatct actaaaagca tgaaaaagag tcatgaacat ggatccaaga
1321aatctcactc taaaaccaag ccaggtattc ttaaaaaaga caaagcagta aaggaaaaga
1381ttcctagtca tcattttatg ccaggaagtc ctaccaagac tgtgtacaaa aaaccccagg
1441aaaagaaagg gtgtaaatgt gggcgtgcta ctcaaaatcc aagtgttctt acatgccgag
1501gccaacgctg cccttgctac tctaaccgca aagcctgctt agattgtata tgtcgtggct
1561gccaaaactc ctatatggcc aatggggaga agaagctgga ggcatttgcc gtgccagaaa
1621aggccttgga gcagaccagg ctcactttgg gcattaacgt gactagcatt gctgtgcgta
1681acgctagtac cagcaccagt gtaataaatg tcacagggtc cccagtaacg acgtttttag
1741ctgccagtac acatgatgat aaaagtttgg atgaagctat agacatgaga ttcgactgtt
1801tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1861attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1921ggatta

Download FASTA (ORF) (Full)