Construct: ORF ccsbBroad304_03637

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005622.1_s304c1, BRDN0000406440
Derived from:
ccsbBroadEn_03637
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DOK4 (55715)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03637
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55715 DOK4 docking protein 4 NM_001369619.1 100% 100%
2 human 55715 DOK4 docking protein 4 NM_001369621.1 100% 100%
3 human 55715 DOK4 docking protein 4 NM_018110.5 100% 100%
4 human 55715 DOK4 docking protein 4 NM_001330556.2 89.3% 89.3% 862_978del
5 human 55715 DOK4 docking protein 4 NM_001369618.1 89.3% 89.3% 862_978del
6 human 55715 DOK4 docking protein 4 NM_001369620.1 89.3% 89.3% 862_978del
7 human 55715 DOK4 docking protein 4 XM_024450347.1 89.3% 89.3% 862_978del
8 human 55715 DOK4 docking protein 4 XM_024450348.1 89.3% 89.3% 862_978del
9 mouse 114255 Dok4 docking protein 4 NM_053246.3 91% 98.1% (many diffs)
10 mouse 114255 Dok4 docking protein 4 XM_006530579.3 91% 98.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1044
ORF length:
978
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc gaccaatttc agtgacatcg tcaagcaagg ctacgtgaag atgaagagca
121ggaagctcgg gatctaccgg aggtgctggc tggtgttccg gaaatcctcc agcaaggggc
181cccagcggct ggagaagtat ccagatgaga agtcggtgtg cctccggggc tgccccaagg
241tgactgagat cagcaacgtc aagtgtgtta cgcggctccc caaggagacc aagcggcagg
301cggtggccat catattcact gatgactcgg cacgtacctt cacctgcgac tcagagctag
361aggcagagga gtggtacaag acactatctg tggagtgtct ggggtcccgc ctcaacgaca
421tcagtctggg agaacctgac ctcctggccc caggggtgca gtgtgaacag acagatcgct
481tcaatgtctt cctgctgccc tgccccaacc tggacgtgta tggcgagtgc aagctgcaga
541tcacccacga gaacatctac ctctgggaca tccacaaccc ccgtgtgaag ctcgtctcgt
601ggcccctctg ctcactgcgc cgctatggcc gggatgccac acgctttacc ttcgaggctg
661gccggatgtg tgatgctggg gaaggactct ataccttcca gacacaagag ggggagcaga
721tttaccagcg cgtccacagt gccaccctgg ccatcgcaga gcagcacaag cgggtcctgc
781tggaaatgga gaagaacgtg aggctgctga acaagggcac ggaacattac tcgtatccct
841gcacacccac gaccatgctg ccgcgcagtg cctactggca ccacatcact ggttcccaga
901acatcgccga agcctccagc tatgctggtg aggggtatgg ggcagcccag gccagctcgg
961aaacagacct cctcaacaga ttcatcctgc taaagccaaa gcccagccag ggggacagca
1021gtgaggccaa gaccccatcc cagtgcccaa ctttcttgta caaagtggtt ggtaagccta
1081tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
1141gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)