Construct: ORF ccsbBroad304_03899

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008625.1_s304c1, BRDN0000409830
Derived from:
ccsbBroadEn_03899
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
ZFAND3 (60685)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_03899
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 60685 ZFAND3 zinc finger AN1-type contai... NM_021943.3 100% 100%
2 human 60685 ZFAND3 zinc finger AN1-type contai... XM_005249269.2 90.3% 89.8% 295_296ins66
3 human 60685 ZFAND3 zinc finger AN1-type contai... XM_017011171.2 86.6% 84.9% (many diffs)
4 human 60685 ZFAND3 zinc finger AN1-type contai... XM_011514790.2 75.3% 75.3% 360_361ins168
5 mouse 21769 Zfand3 zinc finger, AN1-type domain 3 XM_006524027.1 92.2% 95.5% (many diffs)
6 mouse 21769 Zfand3 zinc finger, AN1-type domain 3 NM_148926.2 82.9% 85.9% (many diffs)
7 mouse 21769 Zfand3 zinc finger, AN1-type domain 3 XM_006524028.2 82.8% 85% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
747
ORF length:
681
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttgccatggg agacgctggg agcgagcgca gcaaagcgcc cagcctgccg cctcgctgtc
121cctgcggctt ctgggggtcc agcaagacta tgaatctctg ttccaaatgc tttgctgatt
181ttcaaaagaa acagccagac gatgattccg ctccaagtac aagtaacagc caatcagatt
241tgttttccga agagaccacc agtgacaaca acaatacctc gataaccacg ccaactctta
301gtcccagcca gcagccgctt ccgacagaac tgaatgtaac ttcaccgagt aaagaggagt
361gtgggccatg cacagacaca gctcatgtct cattaatcac accaacaaaa agatcctgtg
421gtacagattc acagtctgag aatgaggctt caccagtaaa acggccacga ctacttgaga
481atacggaacg gtccgaggaa accagtcgat ctaaacagaa gagtcgacgt cggtgcttcc
541agtgccaaac caaactggag ctggtgcagc aggaattggg atcgtgtcgc tgcggttatg
601tgttctgtat gttacatcgc ctccccgagc agcacgactg cacattcgac cacatgggcc
661gtggccggga ggaagccatc atgaaaatgg tgaagctgga ccggaaagtg gggcgctcct
721gccagcgcat cggggagggg tgctcctgac caactttctt gtacaaagtg gttggtaagc
781ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
841ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)