Construct: ORF ccsbBroad304_04166

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002574.1_s304c1, BRDN0000402199
Derived from:
ccsbBroadEn_04166
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UBTD1 (80019)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04166
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80019 UBTD1 ubiquitin domain containing 1 NM_024954.5 100% 100%
2 mouse 226122 Ubtd1 ubiquitin domain containing 1 NM_145500.3 90.9% 98.6% (many diffs)
3 mouse 226122 Ubtd1 ubiquitin domain containing 1 XM_006526997.1 74% 80.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
747
ORF length:
681
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg caactgcgtg gggagacagc gccgggagag gccggcagcc ccgggacacc
121cccgcaagcg agcaggacgc aatgagcccc tgaagaaaga gcggcttaag tggaagagcg
181actaccccat gactgacggg cagctgcgga gcaaacggga tgagttctgg gacacagcgc
241ctgccttcga gggccgcaag gagatctggg atgccctcaa ggctgccgcc tatgctgctg
301aagccaacga ccacgagctg gcccaggcca tcctggatgg agccagcatc accctgcctc
361atggcaccct ctgtgaatgc tacgatgagc tgggcaatcg ctaccagctg cccatctact
421gcctgtcacc gccggtgaac ctgctgctgg agcacacgga ggaggagagc ctggagcccc
481ccgagcctcc acccagcgtg cgccgtgagt tcccgctgaa ggtgcgcctg tccacgggca
541aggacgtgag gctcagcgcc agcctgcccg acacagtggg gcagctcaag aggcagctgc
601acgcccagga gggcatcgag ccatcgtggc agcggtggtt cttctccggg aagctgctca
661cagaccgcac acggctccag gagaccaaga tccagaaaga ttttgtcatc caggtcatca
721tcaaccagcc cccaccaccc caggactgcc caactttctt gtacaaagtg gttggtaagc
781ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
841ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)