Construct: ORF ccsbBroad304_04434

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017949.1_s304c1, BRDN0000410275
Derived from:
ccsbBroadEn_04434
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL22 (84861)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04434
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84861 KLHL22 kelch like family member 22 NM_032775.4 100% 100%
2 human 84861 KLHL22 kelch like family member 22 XM_017029021.2 100% 100%
3 human 84861 KLHL22 kelch like family member 22 XM_017029020.2 95.1% 95.1% 1_96del
4 human 84861 KLHL22 kelch like family member 22 XM_017029019.2 92.9% 92.9% 1_144del
5 human 84861 KLHL22 kelch like family member 22 XM_017029024.1 89.1% 78.4% 1_46del;267_268ins166
6 human 84861 KLHL22 kelch like family member 22 XM_017029023.1 88.3% 81.2% 1_64del;285_286ins166
7 human 84861 KLHL22 kelch like family member 22 XM_017029025.1 87.8% 87.8% 0_1ins231
8 human 84861 KLHL22 kelch like family member 22 XM_017029022.1 86.1% 80.9% 1_112del;333_334ins166
9 human 84861 KLHL22 kelch like family member 22 XM_017029018.2 76.4% 66.7% 1_370del;591_592ins166
10 human 84861 KLHL22 kelch like family member 22 XR_001755341.2 72.7% (many diffs)
11 human 84861 KLHL22 kelch like family member 22 NR_033825.2 68.6% 1_69del;290_291ins166;1806_2362del
12 mouse 224023 Klhl22 kelch-like 22 NM_001359068.1 87.2% 94.6% (many diffs)
13 mouse 224023 Klhl22 kelch-like 22 NM_145479.4 87.2% 94.6% (many diffs)
14 mouse 224023 Klhl22 kelch-like 22 XM_006522041.4 87.2% 94.6% (many diffs)
15 mouse 224023 Klhl22 kelch-like 22 XM_006522039.3 84.7% 91.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1968
ORF length:
1902
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc agaggagcag gagttcaccc agctctgcaa gttgcctgca cagccctcac
121acccacactg cgtgaacaac acctaccgca gcgcacagca ctcccaggct ctgctccgag
181ggctgctggc tctccgggac agcggaatcc tcttcgatgt tgtgctggtg gtggagggca
241gacacatcga ggcccatcgc atcctgctgg ctgcgtcctg cgattacttc agaggaatgt
301ttgctggggg attgaaggag atggaacagg aagaggtcct gatccacggt gtgtcctaca
361atgctatgtg ccaaatccta catttcatat acacctccga gctggagctc agcctgagca
421atgtacaaga gacactggtg gctgcctgcc agcttcagat cccagaaatt atccatttct
481gctgtgattt cctcatgtcc tgggtggacg aagagaacat tctcgatgtc taccggctgg
541cagagctgtt tgacttgagc cgcctgactg agcaactgga cacctatatc ctcaaaaact
601ttgtggcctt ctctcggact gacaagtacc gccagcttcc attggagaag gtctactccc
661tcctcagcag caatcgcctg gaggtctcct gcgagaccga ggtatatgag ggggcccttc
721tctaccatta tagcctggag caggtgcagg ctgaccagat ctcgctgcac gagcccccaa
781agctccttga gacagtgcgg tttccgctga tggaagctga ggtcctgcag cggctgcatg
841acaagctgga ccccagccct ttgagggaca cagtggccag cgccctcatg taccaccgga
901acgagagcct acagcccagc ctgcagagcc cgcaaacgga gctgcggtcg gacttccagt
961gcgttgtggg cttcgggggc attcactcca cgccgtccac tgtcctcagc gaccaggcca
1021agtatctaaa ccccttactg ggagagtgga agcacttcac tgcctccctg gccccccgca
1081tgtccaacca gggcatcgcg gtgctcaaca acttcgtata cttgattgga ggggacaaca
1141atgtccaagg atttcgagca gagtcccgat gctggaggta tgacccacgg cacaaccgct
1201ggttccagat ccagtccctg cagcaggagc acgccgacct gtccgtgtgt gttgtaggca
1261ggtacatcta cgctgtggcg ggccgtgact accacaatga cctgaatgct gtggagcgct
1321acgaccctgc caccaactcc tgggcatacg tggccccact caagagggag gtgtatgccc
1381acgcaggcgc gacgctggag gggaagatgt atatcacctg cggccgcaga ggggaggatt
1441acctgaaaga gacacactgc tacgatccag gcagcaacac ttggcacaca ctggctgatg
1501ggcctgtgcg gcgcgcctgg cacggcatgg caaccctcct caacaagctg tatgtgatcg
1561ggggcagcaa caacgatgcc ggatacagga gggacgtgca ccaggtggcc tgctacagct
1621gcacgtctgg acagtggtca tctgtctgcc cactccctgc tgggcacggt gagcctggca
1681ttgctgtgct ggacaacagg atctatgtgt taggtggccg ctcacacaac cgcggcagcc
1741gcacaggcta cgtgcacatt tacgatgtgg agaaggactg ctgggaggaa gggccccagc
1801tggacaactc catctcaggc ctggcggcct gtgtgctcac cctgccccgc tccctgctcc
1861ttgagccgcc ccgcgggacc cctgaccgca gccaggccga cccggacttt gcctctgagg
1921tgatgagtgt gtctgactgg gaggagtttg acaactccag tgaggactac ccaactttct
1981tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
2041aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

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