Construct: ORF ccsbBroad304_04522

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009977.1_s304c1, BRDN0000410029
Derived from:
ccsbBroadEn_04522
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF625 (90589)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04522
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90589 ZNF625 zinc finger protein 625 NM_145233.4 82.2% 82.2% 1_198del
2 human 90589 ZNF625 zinc finger protein 625 NR_037801.2 54% 1_370del;1289_1698del
3 human 163059 ZNF433 zinc finger protein 433 NM_001308351.1 42.5% 36.4% (many diffs)
4 human 163059 ZNF433 zinc finger protein 433 NM_001308355.1 42.5% 36.4% (many diffs)
5 human 163059 ZNF433 zinc finger protein 433 NM_001308357.1 42.5% 36.4% (many diffs)
6 human 163059 ZNF433 zinc finger protein 433 XM_006722661.3 42.5% 36.4% (many diffs)
7 human 163059 ZNF433 zinc finger protein 433 NM_001308348.1 40.5% 34.7% (many diffs)
8 human 163059 ZNF433 zinc finger protein 433 NM_001308346.1 40.4% 34.6% (many diffs)
9 human 163059 ZNF433 zinc finger protein 433 XM_011527728.2 40.4% 34.6% (many diffs)
10 human 163059 ZNF433 zinc finger protein 433 XM_011527729.2 40.4% 34.6% (many diffs)
11 human 163059 ZNF433 zinc finger protein 433 NM_001080411.2 40.3% 34.5% (many diffs)
12 human 163059 ZNF433 zinc finger protein 433 XM_011527725.2 39.7% 34% (many diffs)
13 human 163059 ZNF433 zinc finger protein 433 XM_017026413.1 39.7% 34% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
984
ORF length:
918
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg agagagactc ttagaaagta agaaagatca tcagcatgga gaaattttga
121cccaggttcc agatgacatg ctgaagaaga aaactccccg agtaaaatca tgtggagaag
181tcagcgtggg tcatgcatcc cttaataggc accacagagc tgacactgga cacaagccat
241atgagtatca ggaatatgga cagaagccat ataaatgtac atactgtaag aaagccttca
301gtgatctccc ctactttcga acacatgaat gggctcacac tggggggaaa ccttatgatt
361gtgaggaatg tggaaaaagc tttatttccc gttcaagcat tcgaagacac aggataatgc
421acagtggaga tggaccctac aaatgtaact tttgtgggaa agccttgatg tgtctcagtt
481tgtatcttat ccacaaacga actcacactg gagagaaacc atatgaatgt aaacagtgtg
541gtaaagcctt tagtcattct ggtagccttc gaatacatga aagaactcac actggagaga
601agccttatga atgcagtgag tgtgggaaag cattccatag ttccacatgc ctccatgcac
661ataaaataac tcacactggg gagaagccgt atgaatgtaa acagtgtggg aaagcctttg
721tttctttcaa ttccgttcga tatcatgaaa gaactcacac tggagagaag ccctatgaat
781gtaagcaatg tgggaaagcc ttcagatctg cctcgcacct tcgaacacat ggaaggactc
841acactggaga gaaaccctat gaatgtaaac aatgtggtaa agcctttgga tgtgcctcga
901gcgttaaaat ccatgaaagg actcacactg gagaaaaacc ctgtagctcc aacacttcga
961aaggccaagg cgagaagatt gcttacccaa ctttcttgta caaagtggtt ggtaagccta
1021tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
1081gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)