Construct: ORF ccsbBroad304_04622

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014830.1_s304c1, BRDN0000460630
Derived from:
ccsbBroadEn_04622
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TP53INP1 (94241)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04622
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 94241 TP53INP1 tumor protein p53 inducible... NM_033285.4 100% 100%
2 human 94241 TP53INP1 tumor protein p53 inducible... XM_011517386.2 100% 100%
3 human 94241 TP53INP1 tumor protein p53 inducible... NM_001135733.2 67.3% 66.2% (many diffs)
4 mouse 60599 Trp53inp1 transformation related prot... NM_021897.3 87.9% 87.5% (many diffs)
5 mouse 60599 Trp53inp1 transformation related prot... NM_001199105.1 60.2% 58.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
789
ORF length:
720
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gttccagagg ctgaataaaa tgtttgtggg tgaagtcagt tcttcctcca
121accaagaacc agaattcaat gagaaagaag atgatgaatg gattcttgtt gacttcatag
181atacttgcac tggtttctca gcagaagaag aagaagaaga ggaggacatc agtgaagagt
241cacctactga gcacccttca gtcttttcct gtttaccggc atctcttgag tgcttggctg
301atacaagtga ttcctgcttt ctccagtttg agtcatgtcc aatggaggag agctggttta
361tcaccccacc cccatgtttt actgcaggtg gattaaccac tatcaaggtg gaaacaagtc
421ctatggaaaa ccttctcatt gaacatccca gcatgtctgt ctatgctgtg cataactcct
481gccctggtct cagtgaggcc acccgtggga ctgatgaatt acatagccca agtagtccca
541gagtggaagc tcaaaatgaa atggggcagc atattcattg ttatgttgca gctcttgctg
601ctcatacaac ttttctggaa caacccaaga gctttcgccc ttcccagtgg ataaaagaac
661acagtgaaag acagcctctt aacagaaata gccttcgtcg ccaaaatctt accagggatt
721gccaccctcg gcaagtcaag cacaatggct gggttgttca tcagccctgc ccgcgtcagt
781acaattactt gccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
841tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
901tcaacctctg gatta

Download FASTA (ORF) (Full)