Construct: ORF ccsbBroad304_04634

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002368.1_s304c1, BRDN0000406213
Derived from:
ccsbBroadEn_04634
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SGF29 (112869)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04634
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 112869 SGF29 SAGA complex associated fac... NM_138414.3 100% 100%
2 human 112869 SGF29 SAGA complex associated fac... XM_017022894.1 87.5% 87% (many diffs)
3 human 112869 SGF29 SAGA complex associated fac... XR_001751821.1 74.9% 1_198del;610_611insGTGACAA;1071_1157del
4 mouse 75565 Sgf29 SAGA complex associated fac... NM_029339.3 90.7% 98.2% (many diffs)
5 mouse 75565 Sgf29 SAGA complex associated fac... XM_017312365.1 90.7% 98.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
945
ORF length:
879
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cctcgtgtct gccgattccc gcattgcaga acttctcaca gagctccatc
121agctgatcaa acaaacccag gaagagcgtt cgcggagcga acacaactta gtgaacatcc
181agaagaccca tgagcggatg cagacagaga acaagatttc tccctattac cggacaaagc
241tgcgtggcct ctacacaacc gccaaggccg atgcagaggc tgagtgcaac atccttcgga
301aagctctgga caagatcgcg gaaatcaagt ctctgttgga agagaggcgg attgcggcca
361agattgccgg tctctacaat gactcggagc caccccggaa gaccatgcgc agaggggtgc
421tgatgaccct gctgcagcag tcggccatga ccctgcccct gtggatcggg aagcctggtg
481acaagccccc acccctctgt ggggccatcc ctgcctcagg agactacgtg gccagacctg
541gagacaaggt ggctgcccgg gtgaaggccg tggatgggga cgagcagtgg atcctggccg
601aggtggtcag ttacagccat gccaccaaca agtatgaggt agatgacatc gatgaagaag
661gcaaagagag acacaccctg agccggcgcc gtgtcatccc gctgccccag tggaaggcca
721acccggagac ggaccctgag gccttgttcc agaaggagca gctcgtgctg gccctgtatc
781cccagactac ctgcttctac cgcgccctga tccatgcgcc cccacagcgg ccccaggatg
841actactcggt cctgtttgaa gacacctcct atgcagatgg ctattcccct cccctcaatg
901tggctcagag atacgtggtg gcttgtaagg aacccaagaa aaagtgccca actttcttgt
961acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1021gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)