Construct: ORF ccsbBroad304_04738

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010326.1_s304c1, BRDN0000400953
Derived from:
ccsbBroadEn_04738
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SFXN4 (119559)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04738
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 119559 SFXN4 sideroflexin 4 NM_213649.2 99.9% 100% 354A>G
2 human 119559 SFXN4 sideroflexin 4 XM_005269525.5 97.2% 97.3% 252_253ins27;327A>G
3 human 119559 SFXN4 sideroflexin 4 XR_945603.3 65.4% (many diffs)
4 human 119559 SFXN4 sideroflexin 4 XM_005269526.2 65.4% 65.5% 0_1ins348;6A>G
5 human 119559 SFXN4 sideroflexin 4 XM_005269527.1 65.4% 65.5% 0_1ins348;6A>G
6 human 119559 SFXN4 sideroflexin 4 XM_011539282.2 65.4% 65.5% 0_1ins348;6A>G
7 human 119559 SFXN4 sideroflexin 4 XM_024447793.1 65.4% 65.5% 0_1ins348;6A>G
8 human 119559 SFXN4 sideroflexin 4 NR_110305.1 64.6% (many diffs)
9 human 119559 SFXN4 sideroflexin 4 XR_001747023.1 60.3% (many diffs)
10 human 119559 SFXN4 sideroflexin 4 XR_001747022.1 56.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1077
ORF length:
1011
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc cctggaacag gaggaggaaa cgcaacctgg gcggctccta ggacgcagag
121acgccgtccc cgccttcatt gagcccaacg tgcgcttctg gatcaccgag cgccaatcct
181ttattcgacg atttcttcaa tggacagaat tattagatcc tacaaatgtg ttcatttcag
241ttgaaagtat agaaaactcg aggcaactat tgtgcacaaa tgaagatgtt tccagccctg
301cctcggcgga ccaaaggata caagaagctt ggaagcggag tcttgcaaca gtgcatcccg
361acagcagcaa cctgatcccc aagctttttc gacctgcagc gttcctgcct ttcatggcgc
421ccacggtatt tttgtcaatg acgccactga aagggatcaa gtccgtgatt ttacctcagg
481ttttcctctg tgcctacatg gcagcgttca acagcatcaa tggaaacaga agttacactt
541gtaagccact agaaagatca ttactaatgg cgggagccgt tgcttcttca actttcttag
601gagtaatccc tcagtttgtc cagatgaagt atggcctgac tggcccttgg attaaaagac
661tcttacctgt gatcttcctc gtgcaagcca gtggaatgaa tgtctacatg tcccgaagtc
721ttgaatccat taaggggatt gcggtcatgg acaaggaagg caatgtcctg ggtcattcca
781gaattgctgg gacaaaggct gttagagaaa cgctagcatc cagaatagtg ctgtttggga
841cctcagctct gattcctgaa gtcttcacct acttttttaa aaggacccag tatttcagga
901aaaacccagg gtcattgtgg attttgaaac tgtcttgtac tgtcctggca atgggactga
961tggtgccatt ttcttttagt atatttccac agattggaca gatacagtac tgtagtcttg
1021aagagaaaat tcagtctcca acagaagaaa cagaaatctt ttatcacaga ggggtgtacc
1081caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
1141ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
1201tta

Download FASTA (ORF) (Full)

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