Construct: ORF ccsbBroad304_04806

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015007.1_s304c1, BRDN0000460291
Derived from:
ccsbBroadEn_04806
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PCP2 (126006)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04806
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 126006 PCP2 Purkinje cell protein 2 NM_174895.3 100% 100%
2 human 126006 PCP2 Purkinje cell protein 2 XM_017026251.2 100% 100%
3 human 126006 PCP2 Purkinje cell protein 2 NM_001271830.2 87.7% 87.5% 0_1ins49;2delT
4 human 126006 PCP2 Purkinje cell protein 2 XM_006722639.3 72.7% 72.7% 0_1ins111
5 human 126006 PCP2 Purkinje cell protein 2 XM_017026252.2 72.7% 72.7% 0_1ins111
6 human 126006 PCP2 Purkinje cell protein 2 XM_017026249.2 53.9% 47.8% 1_163del;214_398del
7 human 126006 PCP2 Purkinje cell protein 2 XM_017026250.2 53.9% 47.8% 1_163del;214_398del
8 human 126006 PCP2 Purkinje cell protein 2 XM_024451346.1 53.9% 47.8% 1_163del;214_398del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
477
ORF length:
408
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gatggatcag gaggagaaga cggaggaagg ctcaggcccc tgtgccgagg
121cgggctcccc agaccaggag ggcttcttca atctgctgag ccacgtgcag ggcgaccgga
181tggagggaca gcgctgttca ctgcaagccg ggccgggcca gaccaccaag agccagagcg
241accccacccc cgagatggac agcctcatgg acatgctggc cagtacccag ggccgccgca
301tggatgacca acgtgtgaca gtcagcagcc tgcccggctt ccagcccgtg gggtccaagg
361acggagcaca gaaacgagct gggaccctca gtccccaacc cctgctcacc cctcaggacc
421cgaccgctct cggcttccgt cggaacagca gcccccagcc cccgacacaa gcccccttgc
481caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
541ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
601tta

Download FASTA (ORF) (Full)