Construct: ORF ccsbBroad304_04858

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009851.1_s304c1, BRDN0000460414
Derived from:
ccsbBroadEn_04858
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CIB4 (130106)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04858
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 130106 CIB4 calcium and integrin bindin... NM_001029881.3 100% 100%
2 human 130106 CIB4 calcium and integrin bindin... XM_011532514.2 89.5% 81% 0_1insATGGGGCA;44_99del
3 human 130106 CIB4 calcium and integrin bindin... XM_017003329.1 87% 84.3% (many diffs)
4 human 130106 CIB4 calcium and integrin bindin... XM_017003330.2 73.1% 68.6% (many diffs)
5 human 130106 CIB4 calcium and integrin bindin... XM_017003331.1 38.9% 22.2% (many diffs)
6 mouse 73259 Cib4 calcium and integrin bindin... NM_028483.1 87.7% 91.8% (many diffs)
7 mouse 73259 Cib4 calcium and integrin bindin... XM_006504153.2 63.4% 65.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
624
ORF length:
555
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggggcaatgc ttgaggtatc agatgcactg ggaggacctg gaagagtacc
121aggccctgac cttcctgacc agaaatgaaa ttctgtgcat ccatgacacc ttcctgaagc
181tctgccctcc tgggaagtac tacaaggagg caacgctcac catggaccag gtcagctccc
241tgccagctct gcgggtcaac cctttcagag accgtatctg cagagtgttc tcccacaaag
301gcatgttctc ctttgaggat gtgctgggca tggcatctgt gttcagcgag caggcctgcc
361caagcctgaa gattgagtat gcctttcgca tctatgattt taatgagaat ggcttcattg
421atgaggagga tctgcagagg atcatcctgc gactgctgaa cagtgatgac atgtctgagg
481acctcctgat ggacctcacg aaccacgtcc tgagtgagtc ggatctggac aatgacaaca
541tgctgtcctt ctcagagttt gaacatgcaa tggccaagtc tccagatttc atgaactcct
601ttcggattca cttctgggga tgcttgccaa ctttcttgta caaagtggtt ggtaagccta
661tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
721gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)