Construct: ORF ccsbBroad304_04873

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010557.1_s304c1, BRDN0000404519
Derived from:
ccsbBroadEn_04873
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CD200R1 (131450)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04873
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 131450 CD200R1 CD200 receptor 1 NM_138806.4 100% 100%
2 human 131450 CD200R1 CD200 receptor 1 NM_170780.3 93.3% 93.3% 66_67ins69
3 human 344807 CD200R1L CD200 receptor 1 like NM_001008784.2 64.6% 54.5% (many diffs)
4 human 344807 CD200R1L CD200 receptor 1 like NM_001199215.1 62% 51.6% (many diffs)
5 human 344807 CD200R1L CD200 receptor 1 like NM_001370552.1 62% 51.6% (many diffs)
6 human 344807 CD200R1L CD200 receptor 1 like XM_011512763.3 62% 51.6% (many diffs)
7 human 131450 CD200R1 CD200 receptor 1 NM_138939.3 53% 48.6% (many diffs)
8 human 131450 CD200R1 CD200 receptor 1 NM_138940.3 46.4% 42.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1110
ORF length:
1044
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct ctgcccttgg agaactgcta acctagggct actgttgatt ttgactatct
121tcttagtggc cgaagcggag ggtgctgctc aaccaaacaa ctcattaatg ctgcaaacta
181gcaaggagaa tcatgcttta gcttcaagca gtttatgtat ggatgaaaaa cagattacac
241agaactactc gaaagtactc gcagaagtta acacttcatg gcctgtaaag atggctacaa
301atgctgtgct ttgttgccct cctatcgcat taagaaattt gatcataata acatgggaaa
361taatcctgag aggccagcct tcctgcacaa aagcctacaa gaaagaaaca aatgagacca
421aggaaaccaa ctgtactgat gagagaataa cctgggtctc cagacctgat cagaattcgg
481accttcagat tcgtaccgtg gccatcactc atgacgggta ttacagatgc ataatggtaa
541cacctgatgg gaatttccat cgtggatatc acctccaagt gttagttaca cctgaagtga
601ccctgtttca aaacaggaat agaactgcag tatgcaaggc agttgcaggg aagccagctg
661cgcatatctc ctggatccca gagggcgatt gtgccactaa gcaagaatac tggagcaatg
721gcacagtgac tgttaagagt acatgccact gggaggtcca caatgtgtct accgtgacct
781gccacgtctc ccatttgact ggcaacaaga gtctgtacat agagctactt cctgttccag
841gtgccaaaaa atcagcaaaa ttatatattc catatatcat ccttactatt attattttga
901ccatcgtggg attcatttgg ttgttgaaag tcaatggctg cagaaaatat aaattgaata
961aaacagaatc tactccagtt gttgaggagg atgaaatgca gccctatgcc agctacacag
1021agaagaacaa tcctctctat gatactacaa acaaggtgaa ggcatctgag gcattacaaa
1081gtgaagttga cacagacctc catactttat acccaacttt cttgtacaaa gtggttggta
1141agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1201ggtggcgcgt taagtcgaca atcaacctct ggatta

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