Construct: ORF ccsbBroad304_05271

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007472.1_s304c1, BRDN0000401091
Derived from:
ccsbBroadEn_05271
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LNX2 (222484)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05271
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 222484 LNX2 ligand of numb-protein X 2 NM_153371.4 100% 100%
2 human 222484 LNX2 ligand of numb-protein X 2 XM_017020434.1 100% 100%
3 human 222484 LNX2 ligand of numb-protein X 2 XM_011534995.2 82.1% 82.1% 850_851ins369
4 mouse 140887 Lnx2 ligand of numb-protein X 2 NM_080795.4 80.3% 89.8% (many diffs)
5 mouse 140887 Lnx2 ligand of numb-protein X 2 XM_006504800.3 80.3% 89.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2136
ORF length:
2070
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg aacaacaagt gatgagatgg tgtctgtgga acagacctcc tcctcttctc
121taaaccccct gtgttttgaa tgtggccaac agcactggac aagagaaaac catttgtaca
181attaccagaa tgaagtggat gatgacctag tctgccatat ttgccttcaa cctctgctgc
241agccactaga cacaccctgt ggacatacat tctgctacaa gtgcctcaga aactttttac
301aagagaaaga tttctgtccg ttggaccgga aaagacttca ttttaagttg tgcaagaagt
361ctagtattct agttcataaa ctcctagaca aattattagt tttatgtcca ttttcttcag
421tgtgcaaaga tgtaatgcaa cgttgtgatc tggaggcaca tctcaaaaac agatgtcctg
481gagcttctca tcggagagtt gccctggaga gaaggaaaac tagtagaact caagcagaga
541ttgagaatga aaatgggccc actctactag atcctgcagg taccttatct ccagaagcag
601actgtttggg gacaggcgca gtgcctgtgg agcggcactt gacatcagcg tctctttcca
661catggagtga ggagcctggc cttgacaacc ctgcctttga ggagagcgct ggagctgaca
721ccacacaaca gccacttagt ttaccagaag gagaaatcac cacgattgaa attcatcggt
781ccaatcctta cattcagtta ggaatcagca ttgtgggtgg caacgaaaca cctttgatta
841acattgtcat ccaggaggtc tatcgggatg gggtcattgc cagagacggg agacttcttg
901ctggagacca gattcttcag gtcaacaact acaatatcag caatgtgtcc cataactatg
961cccgagctgt cctttcccag ccctgcaaca cactgcatct tactgtgctt cgagagaggc
1021gctttggcaa ccgagcacac aaccattctg atagtaactc tccacgagaa gagattttcc
1081aagtggctct tcataaacgg gactctggtg aacagcttgg cattaaattg gtgcgaagga
1141cagatgagcc aggggttttt attcttgacc tgttggaagg ggggttggct gcccaggacg
1201gcaggctaag cagcaatgac cgagtgctgg ccatcaatgg gcacgacctg aagtatggaa
1261ctccggagct tgctgcccag attattcagg ccagtggaga gagagtgaat ttaacaattg
1321ctagaccagg gaaaccccag cctggtaaca ccattagaga agcaggaaat catagcagca
1381gcagccagca ccacacacca ccaccgtatt atagcagacc aagctcacat aaggatctta
1441ctcagtgtgt tacatgccaa gaaaaacaca ttactgtaaa gaaggaacca catgaatccc
1501ttggcatgac cgttgctggg ggcaggggaa gtaagagtgg tgagctgccc atctttgtga
1561ccagtgtgcc accccatggc tgccttgcac gagatggcag aataaagaga ggtgatgtgt
1621tgctaaatat caacggcatt gatttgacca atttaagtca cagtgaggca gttgcaatgc
1681tgaaagccag tgccgcgtcc cctgctgttg cccttaaagc acttgaggtc cagattgttg
1741aggaggcgac tcagaacgcg gaggagcagc cgagtacttt cagcgaaaat gagtatgatg
1801ccagttggtc cccatcatgg gtcatgtggc ttgggcttcc cagcacactt catagctgcc
1861acgatatagt tttacgaaga agttacttgg gaagttgggg ctttagtatc gttggtggat
1921atgaagagaa ccacaccaat cagccttttt tcattaaaac tattgtcttg ggaactcctg
1981cttattatga tggaagatta aagtgtggtg acatgattgt ggccgtaaat gggctgtcaa
2041ccgtgggcat gagccactct gcactagttc ccatgttgaa ggagcagagg aacaaagtca
2101ctctgaccgt tatttgttgg cctggcagcc ttgtataccc aactttcttg tacaaagtgg
2161ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
2221ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

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